RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 HNF4GQ14541 408 aa15.85■□□□□ 0.13
SSU72-204ENST00000378726 WDR25Q64LD2 544 aaPredicted RBP15.85■□□□□ 0.13
SSU72-204ENST00000378726 RAB1CQ92928 201 aa15.85■□□□□ 0.13
SSU72-204ENST00000378726 UBTD1Q9HAC8 227 aa15.85■□□□□ 0.13
SSU72-204ENST00000378726 DCHS2Q6V1P9 2916 aa15.85■□□□□ 0.13
SSU72-204ENST00000378726 UBE2L5PA0A1B0GUS4 154 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 IGKV1D-33P01593 117 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 IGKV1-33P01594 117 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 IGFBP2P18065 325 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 VKORC1L1Q8N0U8 176 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 OR4S2Q8NH73 311 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 TRBV24-1A0A075B6N3 115 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 CT45A6P0DMU7 189 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 CT45A5P0DMU8 189 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 CT45A7P0DMV0 189 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 C11orf42Q8N5U0 333 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 TAF15Q92804 592 aaKnown RBP eCLIP15.84■□□□□ 0.13
SSU72-204ENST00000378726 TIMD4Q96H15 378 aa15.84■□□□□ 0.13
SSU72-204ENST00000378726 TSTD3H0UI37 97 aa15.83■□□□□ 0.13
SSU72-204ENST00000378726 OR9G9P0C7N8 305 aa15.83■□□□□ 0.13
SSU72-204ENST00000378726 DDTP30046 118 aa15.83■□□□□ 0.13
SSU72-204ENST00000378726 ERVK-16P61578 105 aa15.83■□□□□ 0.13
SSU72-204ENST00000378726 OPN1MWP04001 364 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 OPN1MW2P0DN77 364 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 OPN1MW3P0DN78 364 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 CDKN1AP38936 164 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 SLC38A11Q08AI6 406 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 GAMTQ14353 236 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 OR8G2PQ6IF36 304 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 RPP25LQ8N5L8 163 aaKnown RBP15.83■□□□□ 0.12
SSU72-204ENST00000378726 LHX4Q969G2 390 aa15.83■□□□□ 0.12
SSU72-204ENST00000378726 MALRD1Q5VYJ5 2156 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 J3QR06 171 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 HMGB3O15347 200 aaKnown RBP15.82■□□□□ 0.12
SSU72-204ENST00000378726 IGHV1-8P0DP01 117 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 ZNF833PQ6ZTB9 187 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 OR8B3Q8NGG8 313 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 PINX1Q96BK5 328 aaKnown RBP15.82■□□□□ 0.12
SSU72-204ENST00000378726 OR8B2Q96RD0 313 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 QTRT1Q9BXR0 403 aaKnown RBP15.82■□□□□ 0.12
SSU72-204ENST00000378726 PARD6GQ9BYG4 376 aaPredicted RBP15.82■□□□□ 0.12
SSU72-204ENST00000378726 CTDSP1Q9GZU7 261 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 SLC39A9Q9NUM3 307 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 A6NNC1 897 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 FAM90A9PA6NNJ1 464 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 TGOLN2O43493 480 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 IFNA1P01562 189 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 TAS2R60P59551 318 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 ADIRFQ15847 76 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 OR10X1Q8NGY0 326 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 OR4A16Q8NH70 328 aa15.82■□□□□ 0.12
SSU72-204ENST00000378726 NEIL1Q96FI4 390 aaPredicted RBP15.82■□□□□ 0.12
SSU72-204ENST00000378726 PRB1P04280 392 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 ACSM6Q6P461 480 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 C16orf82Q7Z2V1 217 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 ABHD12Q8N2K0 398 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 OR4X1Q8NH49 305 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 SMIM7Q9BQ49 75 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 CHODLQ9H9P2 273 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 DOCK11Q5JSL3 2073 aa15.81■□□□□ 0.12
SSU72-204ENST00000378726 A0A087X0M5 115 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 A0A1B0GX30 115 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 TMEM14EPQ6UXP3 125 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 LINC00311Q8N616 119 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 C8orf31Q8N9H6 132 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 NECAP1Q8NC96 275 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 DTD1Q8TEA8 209 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 ZDHHC16Q969W1 377 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 PACRGQ96M98 296 aaPredicted RBP15.8■□□□□ 0.12
SSU72-204ENST00000378726 BBC3Q96PG8 261 aaPredicted RBP15.8■□□□□ 0.12
SSU72-204ENST00000378726 HIST1H2BLQ99880 126 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 TMEM140Q9NV12 185 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 NAT8Q9UHE5 227 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 TRAV3A0A0B4J244 114 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 PPIAL4CA0A0B4J2A2 164 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 PPIAL4GP0DN37 164 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 ZNF124Q15973 351 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 LBHQ53QV2 105 aaPredicted RBP15.8■□□□□ 0.12
SSU72-204ENST00000378726 SPINK9Q5DT21 86 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 OR9G1Q8NH87 305 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 ZNF596Q8TC21 504 aa15.8■□□□□ 0.12
SSU72-204ENST00000378726 SPTAN1Q13813 2472 aaKnown RBP15.79■□□□□ 0.12
SSU72-204ENST00000378726 NDUFS7O75251 213 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 PFN1P07737 140 aaKnown RBP15.79■□□□□ 0.12
SSU72-204ENST00000378726 MEF2BQ02080 365 aaPredicted RBP15.79■□□□□ 0.12
SSU72-204ENST00000378726 TMEM241Q24JQ0 296 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 GATAD1Q8WUU5 269 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 RPUSD4Q96CM3 377 aaKnown RBP15.79■□□□□ 0.12
SSU72-204ENST00000378726 TMEM133Q9H2Q1 129 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 SLC25A22Q9H936 323 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 SLC35D1Q9NTN3 355 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 RELBQ01201 579 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 RTL8BQ17RB0 113 aa15.79■□□□□ 0.12
SSU72-204ENST00000378726 HRASP01112 189 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 IGKV1-16P04430 117 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 REG1BP48304 166 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 PMS2P11Q13670 270 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 AARDQ4LEZ3 155 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 CYP2G1PQ6ZSU1 146 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 TMEM186Q96B77 213 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms