RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HSD52Q0P140 79 aa4.13□□□□□ -1.75
PCDH9-201ENST00000377861 AMBPP02760 352 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 C20orf78Q9BR46 151 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 SSBP4Q9BWG4 385 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-201ENST00000377861 CLUHP3Q96NS8 147 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 AMELYQ99218 206 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 NABP2Q9BQ15 211 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 ATXN7O15265 892 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-201ENST00000377861 FCGR2BP31994 310 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-201ENST00000377861 C1QL2Q7Z5L3 287 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 PATE1Q8WXA2 126 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 TMEM141Q96I45 108 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 TPRP12270 2363 aaKnown RBP4.12□□□□□ -1.75
PCDH9-201ENST00000377861 VCYO14598 125 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 CCL11P51671 97 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF48Q96MX3 618 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-201ENST00000377861 TRAV24A0A0B4J272 114 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 FOXH1O75593 365 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 MRAP2Q96G30 205 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 MOSP00540 346 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 DPM2O94777 84 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 RLN3Q8WXF3 142 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 C10orf142B7Z368 130 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 MST1P26927 711 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 AESQ08117 197 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 PPP1R27Q86WC6 154 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 FOXE3Q13461 319 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 SCGB3A1Q96QR1 104 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 MGST2Q99735 147 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 ABHD5Q8WTS1 349 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 SMCHD1A6NHR9 2005 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 ATP5G1P05496 136 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 ATP5G3P48201 142 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 ATP5G2Q06055 141 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 HARBI1Q96MB7 349 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 IAPPP10997 89 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 GUSBP11Q6P575 273 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 SGK494Q96LW2 274 aa4.12□□□□□ -1.75
PCDH9-201ENST00000377861 CCL3P10147 92 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 PSG7Q13046 419 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 PDCD1Q15116 288 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 NEGR1Q7Z3B1 354 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF414Q96IQ9 312 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 NUP205Q92621 2012 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 A0A1W2PPE3 182 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 PRSS46E5RG02 174 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF114Q8NC26 417 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 TIAF1O95411 115 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 NRTNQ99748 197 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 DTX4Q9Y2E6 619 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 FAM90A2PQ658T7 463 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 TINAGQ9UJW2 476 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 NUMA1Q14980 2115 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 SLX4Q8IY92 1834 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 PRDM6Q9NQX0 595 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 BRWD1Q9NSI6 2320 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 CT55Q8WUE5 264 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 CLEC7AQ9BXN2 247 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 TCRBV4S1A1TA0A5B7 111 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 HRKO00198 91 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 VWCEQ96DN2 955 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 ZXDAP98168 799 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 HGFACQ04756 655 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 ABHD12Q8N2K0 398 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 KIR3DL3Q8N743 410 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 OCC1Q8TAD7 63 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 LILRA1O75019 489 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 OVOL1O14753 267 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 RNF152Q8N8N0 203 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 OR2K2Q8NGT1 345 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 LTC4SQ16873 150 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 MDP1Q86V88 176 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 E9PLN8 166 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 OTPQ5XKR4 325 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 VKORC1Q9BQB6 163 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 MSGN1A6NI15 193 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 SLC25A16P16260 332 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 MLNRO43193 412 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 GFRA3O60609 400 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 TREML4Q6UXN2 200 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 HLA-DRB4P13762 266 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 COL10A1Q03692 680 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 HLA-DRB4X5D2U9 266 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 TMEM155Q4W5P6 130 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 LCNL1Q6ZST4 164 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 A0A096LPE4 126 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 A0A1W2PPZ6 126 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 TMEM89A2RUT3 159 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 IL6RP08887 468 aaPredicted RBP4.11□□□□□ -1.75
PCDH9-201ENST00000377861 HIGD1BQ9P298 99 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 KIF13AQ9H1H9 1805 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 NRXN2Q9P2S2 1712 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 IL4P05112 153 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 RNF183Q96D59 192 aa4.11□□□□□ -1.75
PCDH9-201ENST00000377861 LSM4Q9Y4Z0 139 aaKnown RBP4.11□□□□□ -1.75
PCDH9-201ENST00000377861 IGLV1-44P01699 117 aa4.1□□□□□ -1.75
PCDH9-201ENST00000377861 PTPRZ1P23471 2315 aaPredicted RBP4.1□□□□□ -1.75
PCDH9-201ENST00000377861 SCN9AQ15858 1988 aa4.1□□□□□ -1.75
PCDH9-201ENST00000377861 ZNF816Q0VGE8 651 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms