RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 IL18BPO95998 194 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 DANCRP0C864 163 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 TMEM183AQ8IXX5 376 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 BMPERQ8N8U9 685 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 A0A0U1RQV5 110 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 LOC390937A0A1W2PQ73 354 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 KBTBD11O94819 623 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 ATRAIDQ6UW56 229 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 PQLC2Q6ZP29 291 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 RBKSQ9H477 322 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 H0Y980 276 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 HLA-DQA1P01909 254 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 IGHV1-2P23083 117 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 FGF12P61328 243 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 ABHD14BQ96IU4 210 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 C5orf66Q9H5L9 145 aa9.16□□□□□ -0.94
HIF3A-205ENST00000377670 NPDC1Q9NQX5 325 aaPredicted RBP9.16□□□□□ -0.94
HIF3A-205ENST00000377670 Q96MF0 132 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 ANAPC1Q9H1A4 1944 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 ZNF407Q9C0G0 2248 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 PHF3Q92576 2039 aaKnown RBP9.15□□□□□ -0.94
HIF3A-205ENST00000377670 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 IGKV1D-33P01593 117 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 IGKV1-33P01594 117 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 FOLR2P14207 255 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 TAF15Q92804 592 aaKnown RBP eCLIP9.15□□□□□ -0.94
HIF3A-205ENST00000377670 PGLYRP4Q96LB8 373 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 KLF4O43474 513 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 SCTP09683 121 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 NPVFQ9HCQ7 196 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 MOB4Q9Y3A3 225 aa9.15□□□□□ -0.94
HIF3A-205ENST00000377670 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 A6NJY4 79 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 A8MWL6 223 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 ZNF735P0CB33 412 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 TIMP3P35625 211 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 PPP1R27Q86WC6 154 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 HIST1H4GQ99525 98 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 TTC32Q5I0X7 151 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 LINC01356Q8N9X3 169 aa9.15□□□□□ -0.95
HIF3A-205ENST00000377670 PLXNA3P51805 1871 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 CEACAM18A8MTB9 384 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 SAP30O75446 220 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 WISP1O95388 367 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 TMEM136Q6ZRR5 245 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 SELENOHQ8IZQ5 122 aaKnown RBP9.14□□□□□ -0.95
HIF3A-205ENST00000377670 E9PQ18 207 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 ZIC3O60481 467 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 Q0VFX4 171 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 LSM10Q969L4 123 aaKnown RBP9.14□□□□□ -0.95
HIF3A-205ENST00000377670 MED13LQ71F56 2210 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 A8MXK9 166 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 EFNB1P98172 346 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 MIC13Q5XKP0 118 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 STHQ8IWL8 128 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 LEAP2Q969E1 77 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 SCGB1A1P11684 91 aa9.14□□□□□ -0.95
HIF3A-205ENST00000377670 CARHSP1Q9Y2V2 147 aaKnown RBP9.14□□□□□ -0.95
HIF3A-205ENST00000377670 SCN8AQ9UQD0 1980 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 GPR146Q96CH1 333 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 QTRT1Q9BXR0 403 aaKnown RBP9.13□□□□□ -0.95
HIF3A-205ENST00000377670 MRPL13Q9BYD1 178 aaKnown RBP9.13□□□□□ -0.95
HIF3A-205ENST00000377670 WNT5BQ9H1J7 359 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 FAM206AQ9NX38 181 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 ZNF506Q5JVG8 444 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 TSC2P49815 1807 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 PLAUP00749 431 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 ARL14EPLP0DKL9 152 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 MRPS18CQ9Y3D5 142 aaKnown RBP9.13□□□□□ -0.95
HIF3A-205ENST00000377670 TRBV5-7A0A0A0MS05 114 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 LYNX1G3V0Z9 82 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 LDLRAD4O15165 306 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 LYNX1P0DP58 116 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 PTGDSP41222 190 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 WNT10AQ9GZT5 417 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 G6PC2Q9NQR9 355 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
HIF3A-205ENST00000377670 IGHV3-11P01762 117 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 HLA-DRB1P01911 266 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 FCGR2BP31994 310 aaPredicted RBP9.13□□□□□ -0.95
HIF3A-205ENST00000377670 CKS2P33552 79 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 NEU1Q99519 415 aa9.13□□□□□ -0.95
HIF3A-205ENST00000377670 NPBWR2P48146 333 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 POC1AQ8NBT0 407 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 SFRP2Q96HF1 295 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 JPT1Q9UK76 154 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 LILRA1O75019 489 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 MYOD1P15172 320 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 FANCMQ8IYD8 2048 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 IGKV3OR2-268A0A0C4DH90 116 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 ZNF324O75467 553 aaPredicted RBP9.12□□□□□ -0.95
HIF3A-205ENST00000377670 GPX1P07203 203 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 CBLN1P23435 193 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 ZNRF1Q8ND25 227 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 DEPPQ9NTK1 212 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 CD8AP01732 235 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 MAS1LP35410 378 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 SRSF6Q13247 344 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms