RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 SLC16A13Q7RTY0 426 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 SLC24A4Q8NFF2 622 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 OR10W1Q8NGF6 305 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 VSTM2AQ8TAG5 236 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 IGFBPL1Q8WX77 278 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 MYO18BQ8IUG5 2567 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 GOSR1O95249 250 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 CA2P00918 260 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 USF1P22415 310 aaPredicted RBP10.43□□□□□ -0.74
TRIM40-206ENST00000376724 PRTN3P24158 256 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 NPY1RP25929 384 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 CNTFRP26992 372 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 HTR1DP28221 377 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 PDLIM4P50479 330 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 SRSF1Q07955 248 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRIM40-206ENST00000376724 VMA21Q3ZAQ7 101 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 VMO1Q7Z5L0 202 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 PARD6GQ9BYG4 376 aaPredicted RBP10.43□□□□□ -0.74
TRIM40-206ENST00000376724 TPSG1Q9NRR2 321 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 CARHSP1Q9Y2V2 147 aaKnown RBP10.43□□□□□ -0.74
TRIM40-206ENST00000376724 E7EUB6 86 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 ADCYAP1P18509 176 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 CD1BP29016 333 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 SNCAP37840 140 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 LHFPL4Q7Z7J7 247 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 OR11H6Q8NGC7 330 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 OR5B3Q8NH48 314 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 TMEM167AQ8TBQ9 72 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 RXFP4Q8TDU9 374 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 PSMG3Q9BT73 122 aaPredicted RBP10.42□□□□□ -0.74
TRIM40-206ENST00000376724 ZNF430Q9H8G1 570 aaPredicted RBP10.42□□□□□ -0.74
TRIM40-206ENST00000376724 LPAR2Q9HBW0 351 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 NIT2Q9NQR4 276 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
TRIM40-206ENST00000376724 RNASEK-C17orf49H0YIS7 233 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 LY6LH3BQJ8 138 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 FOLR2P14207 255 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 LGALS7P47929 136 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 LMO4P61968 165 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
TRIM40-206ENST00000376724 CCL20P78556 96 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 C10orf55Q5SWW7 151 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 HCP5Q6MZN7 132 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 ZFP82Q8N141 532 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 OR4A5Q8NH83 315 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 NRGNQ92686 78 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 EIF5A2Q9GZV4 153 aaKnown RBP10.41□□□□□ -0.74
TRIM40-206ENST00000376724 TNCP24821 2201 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 RAB5BP61020 215 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 SERF2P84101 59 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 TPTE2P1Q5T6R2 138 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 ZNF709Q8N972 641 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 OR1L8Q8NGR8 309 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 NPCDR1Q9BY65 106 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 DPM3Q9P2X0 92 aa10.41□□□□□ -0.74
TRIM40-206ENST00000376724 UTP20O75691 2785 aaKnown RBP10.41□□□□□ -0.74
TRIM40-206ENST00000376724 A0A1W2PPI3 338 aa10.4□□□□□ -0.74
TRIM40-206ENST00000376724 PRSS46E5RG02 174 aa10.4□□□□□ -0.74
TRIM40-206ENST00000376724 UBE2CO00762 179 aa10.4□□□□□ -0.74
TRIM40-206ENST00000376724 TIMM23O14925 209 aa10.4□□□□□ -0.74
TRIM40-206ENST00000376724 SCAF4O95104 1147 aaKnown RBP10.4□□□□□ -0.74
TRIM40-206ENST00000376724 ATP5J2P56134 94 aa10.4□□□□□ -0.74
TRIM40-206ENST00000376724 SP5Q6BEB4 398 aaPredicted RBP10.4□□□□□ -0.74
TRIM40-206ENST00000376724 FAM168AQ92567 244 aa10.4□□□□□ -0.74
TRIM40-206ENST00000376724 TCEAL7Q9BRU2 100 aa10.4□□□□□ -0.74
TRIM40-206ENST00000376724 ASH1LQ9NR48 2969 aaKnown RBP10.4□□□□□ -0.74
TRIM40-206ENST00000376724 IGHV2-70DA0A0C4DH43 119 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 C5orf52A6NGY3 159 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 NDUFS6O75380 124 aaKnown RBP10.4□□□□□ -0.75
TRIM40-206ENST00000376724 COX6B1P14854 86 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 CD24P25063 80 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 CEACAM3P40198 252 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 DVL1P1P54792 670 aaPredicted RBP10.4□□□□□ -0.75
TRIM40-206ENST00000376724 RAB2AP61019 212 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 GUK1Q16774 197 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 TMEM41BQ5BJD5 291 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 ACSM6Q6P461 480 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 SPSB3Q6PJ21 355 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 DPPA3Q6W0C5 159 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 RBMS3Q6XE24 437 aaKnown RBP10.4□□□□□ -0.75
TRIM40-206ENST00000376724 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 PERPQ96FX8 193 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 PIMREGQ9BSJ6 248 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 TIMM9Q9Y5J7 89 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 KPTNQ9Y664 436 aa10.4□□□□□ -0.75
TRIM40-206ENST00000376724 ODF3BA8MYP8 253 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 C9JQL5 133 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 TOX4O94842 621 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 CD5P06127 495 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 HOXB4P17483 251 aaPredicted RBP10.39□□□□□ -0.75
TRIM40-206ENST00000376724 NPBWR1P48145 328 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 GNB1P62873 340 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 PAX2Q02962 417 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 HABP2Q14520 560 aaPredicted RBP10.39□□□□□ -0.75
TRIM40-206ENST00000376724 PSG5Q15238 335 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 ZNF726P1Q15940 193 aa10.39□□□□□ -0.75
TRIM40-206ENST00000376724 SSX2Q16385 188 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms