RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CLDN34H7C241 214 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 M0R1X1 148 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 OPN1MWP04001 364 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 LINC00614P0C842 121 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 OPN1MW2P0DN77 364 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 OPN1MW3P0DN78 364 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 ATP5G3P48201 142 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 FAM210BQ96KR6 192 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 YTHDF2Q9Y5A9 579 aaKnown RBP7.82□□□□□ -1.16
TRIM39-202ENST00000376659 CACNA1DQ01668 2161 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 TRAV38-1A0A0B4J264 116 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 HMGB3O15347 200 aaKnown RBP7.82□□□□□ -1.16
TRIM39-202ENST00000376659 IGLV2-23P01705 113 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 IGKV1-16P04430 117 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 ZNF137PP52743 207 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 MRPS11P82912 194 aaKnown RBP7.82□□□□□ -1.16
TRIM39-202ENST00000376659 TMEM30BQ3MIR4 351 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 DOLPP1Q86YN1 238 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 C11orf42Q8N5U0 333 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 FAM216BQ8N7L0 139 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 C8orf31Q8N9H6 132 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 OR4X1Q8NH49 305 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 ST6GALNAC6Q969X2 333 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 SRD5A3Q9H8P0 318 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 RNF24Q9Y225 148 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 ZNF257Q9Y2Q1 563 aa7.82□□□□□ -1.16
TRIM39-202ENST00000376659 RBM7Q9Y580 266 aaKnown RBP7.82□□□□□ -1.16
TRIM39-202ENST00000376659 PSMB3P49720 205 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 KIAA0141Q14154 515 aaPredicted RBP7.81□□□□□ -1.16
TRIM39-202ENST00000376659 PRSS8Q16651 343 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 ACTR3CQ9C0K3 210 aaPredicted RBP7.81□□□□□ -1.16
TRIM39-202ENST00000376659 KCNIP2Q9NS61 270 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 RNF7Q9UBF6 113 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 URGCP-MRPS24S4R325 110 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 CD99P14209 185 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 CDC34P49427 236 aaPredicted RBP7.81□□□□□ -1.16
TRIM39-202ENST00000376659 RAB7AP51149 207 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 C1orf87Q8N0U7 546 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 OR10G8Q8NGN5 311 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 PLPPR2Q96GM1 343 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 SLC39A9Q9NUM3 307 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 DPRXA6NFQ7 191 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 K7EN84 100 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 SPRY3O43610 288 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 PAGE4O60829 102 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 RPS10P46783 165 aaKnown RBP7.81□□□□□ -1.16
TRIM39-202ENST00000376659 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 OR4S2Q8NH73 311 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 NDUFAF3Q9BU61 184 aa7.81□□□□□ -1.16
TRIM39-202ENST00000376659 A6NNC1 897 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 CRYABP02511 175 aaKnown RBP7.8□□□□□ -1.16
TRIM39-202ENST00000376659 GYPAP02724 150 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 THBS3P49746 956 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 PRCDQ00LT1 54 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 TMEM241Q24JQ0 296 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 ABHD12Q8N2K0 398 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 PNKDQ8N490 385 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 ELOA3CA0A087WX78 387 aaPredicted RBP7.8□□□□□ -1.16
TRIM39-202ENST00000376659 E7EUB6 86 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 IFNA1P01562 189 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 IGHV3-7P01780 117 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 EFNB3Q15768 340 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 LTC4SQ16873 150 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 KRTCAP3Q53RY4 240 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 IMMP2LQ96T52 175 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 SMIM7Q9BQ49 75 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 CHODLQ9H9P2 273 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 LINC00312Q9Y6C7 94 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 ARL2-SNX15V9GYD0 113 aa7.8□□□□□ -1.16
TRIM39-202ENST00000376659 SHISA9B4DS77 424 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 HRASP01112 189 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 ARL14EPLP0DKL9 152 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 AREGP15514 252 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 RPL29P47914 159 aaKnown RBP7.79□□□□□ -1.16
TRIM39-202ENST00000376659 CEBPGP53567 150 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 RBX1P62877 108 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 RNASE8Q8TDE3 154 aaKnown RBP7.79□□□□□ -1.16
TRIM39-202ENST00000376659 RNASEH2CQ8TDP1 164 aaKnown RBP7.79□□□□□ -1.16
TRIM39-202ENST00000376659 SEPSECSQ9HD40 501 aaKnown RBP7.79□□□□□ -1.16
TRIM39-202ENST00000376659 CTSZQ9UBR2 303 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 SLC45A2Q9UMX9 530 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 UPK2O00526 184 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 CA2P00918 260 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 ACOT6Q3I5F7 207 aaPredicted RBP7.79□□□□□ -1.16
TRIM39-202ENST00000376659 PRAMEF5Q5TYX0 476 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 OR5AN1Q8NGI8 311 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 NEIL1Q96FI4 390 aaPredicted RBP7.79□□□□□ -1.16
TRIM39-202ENST00000376659 HIST1H2BLQ99880 126 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 BET1LQ9NYM9 111 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 PXMP4Q9Y6I8 212 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 A0A1W2PPQ1 181 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 A8MWP6 167 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 C11orf94C9JXX5 98 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 C17orf112F2Z3M2 114 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 TGOLN2O43493 480 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 PDE6DO43924 150 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 FOXH1O75593 365 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 CRYAAP02489 173 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 LINC00310P59036 64 aa7.79□□□□□ -1.16
TRIM39-202ENST00000376659 TNFAIP6P98066 277 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms