RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GABRA6Q16445 453 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CENPWQ5EE01 88 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 PEAR1Q5VY43 1037 aaPredicted RBP11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 MMD2Q8IY49 270 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CISD2Q8N5K1 135 aaKnown RBP11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NAV3Q8IVL0 2385 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 A0A1B0GW64 132 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 PFN1P07737 140 aaKnown RBP11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ADH4P08319 380 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TIMP3P35625 211 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ZADH2Q8N4Q0 377 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 OR10W1Q8NGF6 305 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 IGF2RP11717 2491 aa11.96□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ERHP84090 104 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DAZAP2Q15038 168 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 Q56UQ5 140 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TREML4Q6UXN2 200 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DMRTC2Q8IXT2 367 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CD177Q8N6Q3 437 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CFAP47Q6ZTR5 3102 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 RAB4AP20338 218 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SRIP30626 198 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 FAM27E3Q08E93 113 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SLC35E4Q6ICL7 350 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 Q6ZT83 130 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ZNF295-AS1Q8N0V1 137 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 OR1B1Q8NGR6 318 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ARL2-SNX15V9GYD0 113 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DOPEY2Q9Y3R5 2298 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 C15orf62A8K5M9 175 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 MGST3O14880 152 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.54e-6■■■■■ 26.9
TNFRSF1B-201ENST00000376259 C10orf55Q5SWW7 151 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NABP2Q9BQ15 211 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 KCNIP2Q9NS61 270 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DCAF16Q9NXF7 216 aa11.95□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TRAV1-1A0A0B4J248 108 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TMEM210A6NLX4 147 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DIRC3C9JPN6 131 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 COX7A1P24310 79 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ACP1P24666 158 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DUTP33316 252 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 GPR6P46095 362 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TAS2R45P59539 299 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 OR4A47Q6IF82 309 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 Q6ZN92 141 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 OR9G1Q8NH87 305 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 STARD4Q96DR4 205 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DCHS1Q96JQ0 3298 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SLC25A5P05141 298 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TMEM170AQ8WVE7 144 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 LINC00479Q96M42 142 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 PPIAL4AQ9Y536 164 aa11.94□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 USF1P22415 310 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CCKARP32238 428 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 FOXA3P55318 350 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ZNF146Q15072 292 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ZNF355PQ9NSJ1 428 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SLC45A2Q9UMX9 530 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SELENOKQ9Y6D0 94 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CCL3L1P16619 93 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TNFSF10P50591 281 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 RNF151Q2KHN1 245 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NRN1LQ496H8 165 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CPAMD8Q8IZJ3 1885 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 KLK10O43240 276 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 GCGP01275 180 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 DLX1P56177 255 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
TNFRSF1B-201ENST00000376259 IGHV2OR16-5A0A0B4J2B6 119 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NUPR1O60356 82 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CNIH1O95406 144 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 MOSP00540 346 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 FRMD6-AS1P0C7T7 363 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 LINC00869P0C866 280 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NPPCP23582 126 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 HNRNPA3P51991 378 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 MORN2Q502X0 79 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 OR2T6Q8NHC8 308 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 FLYWCH2Q96CP2 140 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 MUC6Q6W4X9 2439 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ANKHD1Q8IWZ3 2542 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 HSPE1P61604 102 aaKnown RBP11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 HES1Q14469 280 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 C22orf15Q8WYQ4 148 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ST6GALNAC6Q969X2 333 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 MGST2Q99735 147 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SSBP4Q9BWG4 385 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 GGTLC1Q9BX51 225 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 YTHDF2Q9Y5A9 579 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms