RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 PPP1R27Q86WC6 154 aa8.91□□□□□ -0.98
PDPN-202ENST00000376057 TAF15Q92804 592 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDPN-202ENST00000376057 NPFFO15130 113 aa8.91□□□□□ -0.98
PDPN-202ENST00000376057 IFNA10P01566 189 aa8.91□□□□□ -0.98
PDPN-202ENST00000376057 GPX4P36969 197 aaPredicted RBP8.91□□□□□ -0.98
PDPN-202ENST00000376057 F2RL1P55085 397 aa8.91□□□□□ -0.98
PDPN-202ENST00000376057 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
PDPN-202ENST00000376057 CACNG8Q8WXS5 425 aa8.91□□□□□ -0.98
PDPN-202ENST00000376057 CXorf58Q96LI9 332 aa8.91□□□□□ -0.98
PDPN-202ENST00000376057 WDR83OSQ9Y284 106 aa8.91□□□□□ -0.98
PDPN-202ENST00000376057 CENPVL3A0A0U1RRI6 287 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 ZNF705EA8MWA4 302 aaPredicted RBP8.9□□□□□ -0.98
PDPN-202ENST00000376057 SLC25A17O43808 307 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 ETV3LQ6ZN32 361 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 LHFPL4Q7Z7J7 247 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 RNASEH2CQ8TDP1 164 aaKnown RBP8.9□□□□□ -0.98
PDPN-202ENST00000376057 MEGF9Q9H1U4 602 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 EPG5Q9HCE0 2579 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 TRAV1-1A0A0B4J248 108 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 NBR2O15453 112 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 FBXO24O75426 580 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 CA2P00918 260 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 SNRNP70P08621 437 aaKnown RBP8.9□□□□□ -0.98
PDPN-202ENST00000376057 RNASE2P10153 161 aaKnown RBP8.9□□□□□ -0.98
PDPN-202ENST00000376057 SUB1P53999 127 aaKnown RBP eCLIP8.9□□□□□ -0.98
PDPN-202ENST00000376057 LINC01356Q8N9X3 169 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 HSD17B11Q8NBQ5 300 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 MARC2Q969Z3 335 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 EAF1Q96JC9 268 aaPredicted RBP8.9□□□□□ -0.98
PDPN-202ENST00000376057 SH3BGRL3Q9H299 93 aa8.9□□□□□ -0.98
PDPN-202ENST00000376057 IGHV1-69DA0A0B4J2H0 117 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 A0A1B0GW64 132 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 BTBD17A6NE02 478 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 IGHV1-69P01742 117 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 BRS3P32247 399 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 AANATQ16613 207 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.99
PDPN-202ENST00000376057 METTL1Q9UBP6 276 aaKnown RBP8.9□□□□□ -0.99
PDPN-202ENST00000376057 MBP02144 154 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 FAM106CPP0CH98 169 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 PMS2P11Q13670 270 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 NPVFQ9HCQ7 196 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 LSM4Q9Y4Z0 139 aaKnown RBP8.89□□□□□ -0.99
PDPN-202ENST00000376057 C17orf112F2Z3M2 114 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 KLK9Q2XQG4 91 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 SPINK9Q5DT21 86 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 PXDC1Q5TGL8 231 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 DYNAPQ8N1N2 210 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 NRGNQ92686 78 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 KCNIP2Q9NS61 270 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 KLK9Q9UKQ9 250 aa8.89□□□□□ -0.99
PDPN-202ENST00000376057 IGHV3-72A0A0B4J1Y9 119 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 IGLC7A0M8Q6 106 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 TEX46H3BTG2 121 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 RPL27AP46776 148 aaKnown RBP8.88□□□□□ -0.99
PDPN-202ENST00000376057 LFNGQ8NES3 379 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 KIAA1456Q9P272 454 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 HILPDAQ9Y5L2 63 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 CORTO00230 105 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 IGKV1D-33P01593 117 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 IGKV1-33P01594 117 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 SAA4P35542 130 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 KRTAP10-9P60411 292 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 WT1-ASQ06250 92 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 PJVKQ0ZLH3 352 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 OR1L6Q8NGR2 347 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 MBD3L1Q8WWY6 194 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 C1RLQ9NZP8 487 aa8.88□□□□□ -0.99
PDPN-202ENST00000376057 TEX22C9J3V5 150 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 NDUFS6O75380 124 aaKnown RBP8.87□□□□□ -0.99
PDPN-202ENST00000376057 MYOD1P15172 320 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 CNTFRP26992 372 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 OPRK1P41145 380 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 SSBP2P81877 361 aaPredicted RBP8.87□□□□□ -0.99
PDPN-202ENST00000376057 PRB3Q04118 309 aaPredicted RBP8.87□□□□□ -0.99
PDPN-202ENST00000376057 SSX2Q16385 188 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 C5orf64Q2M2E5 130 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 AKR1C8PQ5T2L2 129 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 SLC25A24Q6NUK1 477 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 NPCDR1Q9BY65 106 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 ZFYVE26Q68DK2 2539 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 UBE2L5PA0A1B0GUS4 154 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 E7EUB6 86 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 IFNA4P05014 189 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 CTRB1P17538 263 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 SNCAP37840 140 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 TMEM249Q2WGJ8 235 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 CTRB2Q6GPI1 263 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 ZNF562Q6V9R5 426 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 TMEM182Q6ZP80 229 aaPredicted RBP8.87□□□□□ -0.99
PDPN-202ENST00000376057 Q6ZRG5 221 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 PIP4P2Q8N4L2 257 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 OR1P1Q8NH06 330 aa8.87□□□□□ -0.99
PDPN-202ENST00000376057 PCNPQ8WW12 178 aaKnown RBP8.87□□□□□ -0.99
PDPN-202ENST00000376057 FBXO7Q9Y3I1 522 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms