RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 J3QR06 171 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 ACTL6BO94805 426 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 ADMP35318 185 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 GNG10P50151 68 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 PRR20EP86478 221 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 PRR20CP86479 221 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 PRR20DP86480 221 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 PRR20BP86481 221 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 PRR20AP86496 221 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 FAM222BQ8WU58 562 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 DSPP15924 2871 aaKnown RBP11.94□□□□□ -0.5
MSH5-201ENST00000375703 K7EN84 100 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 NUPR1O60356 82 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 SCGB1D1O95968 90 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 FTH1P19P0C7X4 201 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 ARL6IP6Q8N6S5 226 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 NEUROG1Q92886 237 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 GCM1Q9NP62 436 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 IL36BQ9NZH7 164 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 PRNDQ9UKY0 176 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 IGLV3-9A0A075B6K5 115 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 A8MXE2 369 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 SLC17A3O00476 420 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 OR4A8P0C604 315 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 LINC00869P0C866 280 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 MIR17HGQ75NE6 70 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 PIP4P1Q86T03 277 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 ZNF439Q8NDP4 499 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 ZCCHC14Q8WYQ9 949 aaKnown RBP11.93□□□□□ -0.5
MSH5-201ENST00000375703 LRFN3Q9BTN0 628 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 FKBP11Q9NYL4 201 aa11.93□□□□□ -0.5
MSH5-201ENST00000375703 GATA4P43694 442 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 TNFAIP6P98066 277 aaPredicted RBP11.92□□□□□ -0.5
MSH5-201ENST00000375703 POU2AF1Q16633 256 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 ZADH2Q8N4Q0 377 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 C11orf52Q96A22 123 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 CCL13Q99616 98 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 NDUFAF3Q9BU61 184 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 PLEKHA3Q9HB20 300 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 SELENOVP59797 346 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 FAM122AQ96E09 287 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
MSH5-201ENST00000375703 C9JCJ5 164 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 FNDC10F2Z333 226 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 PCP4P48539 62 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 PSG5Q15238 335 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 STUMQ69YW2 141 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 BEND2Q8NDZ0 799 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 MISP3Q96FF7 219 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 EAF1Q96JC9 268 aaPredicted RBP11.91□□□□□ -0.5
MSH5-201ENST00000375703 NABP2Q9BQ15 211 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 SFXN3Q9BWM7 321 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 LY96Q9Y6Y9 160 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 UPK2O00526 184 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 MMP23AO75900 390 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 AREGP15514 252 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 LBHQ53QV2 105 aaPredicted RBP11.91□□□□□ -0.5
MSH5-201ENST00000375703 RPRMLQ8N4K4 120 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 MS4A10Q96PG2 267 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
MSH5-201ENST00000375703 TRAV9-1A0A075B6T8 112 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 GRIFINA4D1Z8 144 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 HELTA6NFD8 242 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 SRRM4A7MD48 611 aaKnown RBP11.9□□□□□ -0.5
MSH5-201ENST00000375703 CT45A6P0DMU7 189 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 CT45A5P0DMU8 189 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 CT45A7P0DMV0 189 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 CBLN1P23435 193 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 PRCDQ00LT1 54 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 USF2Q15853 346 aaPredicted RBP11.9□□□□□ -0.5
MSH5-201ENST00000375703 MOB3BQ86TA1 216 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 SLC35D1Q9NTN3 355 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 ZNF257Q9Y2Q1 563 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 IGHV1-46P01743 117 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 IGKV1-16P04430 117 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 SNRPCP09234 159 aaKnown RBP11.9□□□□□ -0.5
MSH5-201ENST00000375703 TAS2R60P59551 318 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 ERVFC1-1P60608 527 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 RTL8BQ17RB0 113 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 FAM216BQ8N7L0 139 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 SPOCK3Q9BQ16 436 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 TMEM167BQ9NRX6 74 aa11.9□□□□□ -0.5
MSH5-201ENST00000375703 SLC25A10Q9UBX3 287 aaPredicted RBP11.9□□□□□ -0.5
MSH5-201ENST00000375703 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 SELENOTP62341 195 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 OR5I1Q13606 314 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 MRPL18Q9H0U6 180 aaKnown RBP11.89□□□□□ -0.51
MSH5-201ENST00000375703 FAM215AQ9Y5M1 114 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 SPENQ96T58 3664 aaKnown RBP11.89□□□□□ -0.51
MSH5-201ENST00000375703 GATA2P23769 480 aaPredicted RBP11.89□□□□□ -0.51
MSH5-201ENST00000375703 CRYBB3P26998 211 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 RAB4BP61018 213 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 RPEL1Q2QD12 228 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 ZNF788Q6ZQV5 615 aa11.89□□□□□ -0.51
MSH5-201ENST00000375703 SLC25A48Q6ZT89 311 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms