RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 GFRALQ6UXV0 394 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 IGHV5-10-1A0A0J9YXX1 117 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 CCL3P10147 92 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTCH1-204ENST00000375290 MDP1Q86V88 176 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 FGF11Q92914 225 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 IGKV3D-11A0A0A0MRZ8 115 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 GAS1P54826 345 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 LINC00305Q7Z4B0 112 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 TTTY12Q9BZ98 90 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 NEUROG3Q9Y4Z2 214 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 HRKO00198 91 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 TMEM208Q9BTX3 173 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 CD5LO43866 347 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 WNT5AP41221 380 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 PCSK4Q6UW60 755 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 TMEM52Q8NDY8 209 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 GAGE13Q4V321 117 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 PGLYRP4Q96LB8 373 aa8.64□□□□□ -1.03
PTCH1-204ENST00000375290 C16orf97H3BN30 126 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 THY1P04216 161 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 PDCD1Q15116 288 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 KLF2Q9Y5W3 355 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-204ENST00000375290 HS3ST3B1Q9Y662 390 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 IQCF6A8MYZ5 107 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 SHISA8B8ZZ34 492 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 GPX1P07203 203 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 LOXL4Q96JB6 756 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 ANAPC13Q9BS18 74 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 DPM2O94777 84 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 Q6ZT83 130 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 EMP1P54849 157 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 APOMO95445 188 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 C19orf54Q5BKX5 351 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 OR5AN1Q8NGI8 311 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 HES7Q9BYE0 225 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 APOHP02749 345 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-204ENST00000375290 ZFAND6Q6FIF0 208 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 GUSBP11Q6P575 273 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 CRISPLD2Q9H0B8 497 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 R3HDMLQ9H3Y0 253 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 DNAJC13O75165 2243 aa8.63□□□□□ -1.03
PTCH1-204ENST00000375290 CYTL1Q9NRR1 136 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 WDR83OSQ9Y284 106 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 A0A1W2PQF6 199 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 UCN2Q96RP3 112 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 FAM181BA6NEQ2 426 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 MT-CO3P00414 261 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 C14orf144Q96I85 54 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 MOB4Q9Y3A3 225 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 LINC00312Q9Y6C7 94 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 CX3CL1P78423 397 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 SPRED2Q7Z698 418 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 SNRPD3P62318 126 aaKnown RBP8.62□□□□□ -1.03
PTCH1-204ENST00000375290 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 IL9P15248 144 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 MAGEA5P43359 124 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 A8MWV9 139 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 ESDP10768 282 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 LDLRAD2Q5SZI1 272 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 GLRXP35754 106 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 C3AR1Q16581 482 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 CT55Q8WUE5 264 aa8.62□□□□□ -1.03
PTCH1-204ENST00000375290 AURKAIP1Q9NWT8 199 aaPredicted RBP8.62□□□□□ -1.03
PTCH1-204ENST00000375290 TNS1Q9HBL0 1735 aaKnown RBP8.62□□□□□ -1.03
PTCH1-204ENST00000375290 TRBV20-1A0A075B6N2 111 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 MGPP08493 103 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
PTCH1-204ENST00000375290 CACNA1DQ01668 2161 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 C2CD4DB7Z1M9 353 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 HES3Q5TGS1 186 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 TMEM92Q6UXU6 159 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 KBTBD11-OT1A0A1B0GTJ5 212 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 PPIHO43447 177 aaKnown RBP8.61□□□□□ -1.03
PTCH1-204ENST00000375290 CCL2P13500 99 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 UCNP55089 124 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 SBF1O95248 1867 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 PRKNO60260 465 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-204ENST00000375290 PYY3Q5JQD4 70 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 LINC01551Q86U37 167 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 RPRMLQ8N4K4 120 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 RNF5Q99942 180 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 IGLV3-19P01714 112 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 SLC25A39Q9BZJ4 359 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-204ENST00000375290 IGHV4-34P06331 123 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 ZNF497Q6ZNH5 498 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 FADS6Q8N9I5 356 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 EEF1AKMT3Q96AZ1 226 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 MYOFQ9NZM1 2061 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 GZMBP10144 247 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 SAMD5Q5TGI4 173 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 SPATA31B1PQ5VZV4 182 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 TMEM14EPQ6UXP3 125 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 ACP7Q6ZNF0 438 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 WFDC6Q9BQY6 131 aa8.61□□□□□ -1.03
PTCH1-204ENST00000375290 CLEC7AQ9BXN2 247 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms