RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 BET1LQ9NYM9 111 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 HSPB7Q9UBY9 170 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 VPREB3Q9UKI3 123 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 PRNDQ9UKY0 176 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 FAM96BQ9Y3D0 163 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TRAV3A0A0B4J244 114 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 BTBD17A6NE02 478 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SSSCA1O60232 199 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 KBTBD11O94819 623 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 MOSP00540 346 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 IFNA17P01571 189 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 IGLV2-23P01705 113 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SAA1P0DJI8 122 aaPredicted RBP8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 S100A11P31949 105 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 BRS3P32247 399 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SAA4P35542 130 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 AP2S1P53680 142 aaPredicted RBP8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SPCS3P61009 180 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 HSPE1P61604 102 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RPL23AP62750 156 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 ZNF429Q86V71 674 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 KCNRGQ8N5I3 272 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TEX45Q8NA69 505 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OR2T10Q8NGZ9 312 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 C17orf50Q8WW18 174 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 AJUBAQ96IF1 538 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SMIM8Q96KF7 97 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 C11orf1Q9H5F2 150 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 ZC4H2Q9NQZ6 224 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 PLSCR3Q9NRY6 295 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SIGLEC9Q9Y336 463 aa8.7□□□□□ -1.02
HLA-DQA1-202ENST00000374949 C15orf61A6NNL5 157 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TSPAN9O75954 239 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 LY86O95711 162 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 FBP1P09467 338 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 FAM106CPP0CH98 169 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RPL12P30050 165 aaKnown RBP8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 PAX9P55771 341 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TAS2R30P59541 319 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OR2B8PP59922 312 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 EBI3Q14213 229 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 ZNF345Q14585 488 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OPCMLQ14982 345 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 PSG5Q15238 335 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 KPRPQ5T749 579 aaPredicted RBP8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SAMD5Q5TGI4 173 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 THNSL2Q86YJ6 484 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OR2C3Q8N628 320 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 C11orf44Q8N8P7 122 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TMEM167AQ8TBQ9 72 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 AQP10Q96PS8 301 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SLC25A31Q9H0C2 315 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 ARL6Q9H0F7 186 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TMEM14BQ9NUH8 114 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 PSENENQ9NZ42 101 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 FOXA2Q9Y261 457 aaPredicted RBP8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OR51B2Q9Y5P1 312 aa8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 KMT2CQ8NEZ4 4911 aaKnown RBP8.69□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TEX50A0A1B0GTY4 177 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SLC25A17O43808 307 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TSC22D2O75157 780 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 IGKV1D-33P01593 117 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 IGKV1-33P01594 117 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OPN1MWP04001 364 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CRYGBP07316 175 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SNRNP70P08621 437 aaKnown RBP8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OPN1MW2P0DN77 364 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 OPN1MW3P0DN78 364 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 PAX6P26367 422 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 HES1Q14469 280 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 HNF4GQ14541 408 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 DTD1Q8TEA8 209 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 EAF1Q96JC9 268 aaPredicted RBP8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CIB3Q96Q77 187 aaPredicted RBP8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CLCC1Q96S66 551 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 MEGF9Q9H1U4 602 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 LYRM2Q9NU23 88 aaPredicted RBP8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 ZNF257Q9Y2Q1 563 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 WSB1Q9Y6I7 421 aa8.68□□□□□ -1.02
HLA-DQA1-202ENST00000374949 KANTRA0A1W2PQU2 76 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 FAM24AA6NFZ4 105 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 MSGN1A6NI15 193 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 SPDEFO95238 335 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 TMEM50AO95807 157 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 FGF2P09038 288 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 IAPPP10997 89 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CD24P25063 80 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CNTFRP26992 372 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 MAS1LP35410 378 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 CAV2P51636 162 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RPL8P62917 257 aaKnown RBP8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 RPP30P78346 268 aaKnown RBP8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 MMD2Q8IY49 270 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 NPBQ8NG41 125 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 ARPC5LQ9BPX5 153 aa8.67□□□□□ -1.02
HLA-DQA1-202ENST00000374949 GON7Q9BXV9 100 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms