RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ASPHD1Q5U4P2 390 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 SHISA2Q6UWI4 295 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 ST8SIA1Q92185 356 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 FAM168AQ92567 244 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 MTCH1Q9NZJ7 389 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 CLCF1Q9UBD9 225 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 COL5A1P20908 1838 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-201ENST00000373019 SEC16AO15027 2179 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 PATE3B3GLJ2 98 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 TNFSF11O14788 317 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 Q6ZSR6 202 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 SPATA25Q9BR10 227 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 PIGBOS1A0A0B4J2F0 54 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 KIR2DS1A0A191URI9 304 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 IGLV2-8P01709 118 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 KIR2DS4P43632 304 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
SF3A3-201ENST00000373019 KIR2DS1Q14954 304 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 ODF1Q14990 250 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 CENPWQ5EE01 88 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF611Q8N823 705 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 VSTM2AQ8TAG5 236 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 NEU4Q8WWR8 484 aaPredicted RBP7.93□□□□□ -1.14
SF3A3-201ENST00000373019 ARRDC1-AS1Q9H2J1 176 aa7.93□□□□□ -1.14
SF3A3-201ENST00000373019 EPG5Q9HCE0 2579 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 A0A1W2PQF6 199 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 TSPAN13O95857 204 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 CXorf1O96002 111 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 RHBDD2Q6NTF9 364 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 WDR74Q6RFH5 385 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-201ENST00000373019 PQLC2Q6ZP29 291 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 C16orf47Q6ZP98 133 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-201ENST00000373019 WIPF2Q8TF74 440 aaPredicted RBP7.92□□□□□ -1.14
SF3A3-201ENST00000373019 WDR83OSQ9Y284 106 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 LAMA1P25391 3075 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 IGHV1-24A0A0C4DH33 117 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 A0A1W2PNR3 127 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 C21orf140B9A014 251 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 P0C879 139 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 COX8AP10176 69 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 CRYGSP22914 178 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 GPM6AP51674 278 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 CEACAM21Q3KPI0 293 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 MRPL21Q7Z2W9 205 aaKnown RBP7.92□□□□□ -1.14
SF3A3-201ENST00000373019 OR5A1Q8NGJ0 315 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 BLNKQ8WV28 456 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 OR1A1Q9P1Q5 309 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 IGKV3D-11A0A0A0MRZ8 115 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 A0A1W2PPM0 123 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 IZUMO1RA6ND01 250 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF441Q8N8Z8 693 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF479Q96JC4 524 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 MS4A6AQ9H2W1 248 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 SAP30LQ9HAJ7 183 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 SPCS1Q9Y6A9 102 aa7.92□□□□□ -1.14
SF3A3-201ENST00000373019 TNRC6AQ8NDV7 1962 aaKnown RBP7.92□□□□□ -1.14
SF3A3-201ENST00000373019 ZFYVE26Q68DK2 2539 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 APC2O95996 2303 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.91□□□□□ -1.14
SF3A3-201ENST00000373019 ISLRO14498 428 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 SLC25A17O43808 307 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 FOXH1O75593 365 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 RHBDL1O75783 438 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
SF3A3-201ENST00000373019 BCL3P20749 454 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 GNG4P50150 75 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 FOXI2Q6ZQN5 318 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 FER1L6-AS2Q96M78 137 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
SF3A3-201ENST00000373019 PLEK2Q9NYT0 353 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 PI4KAP42356 2102 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 FGF6P10767 208 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 KIR3DS1Q14943 382 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 PRR31Q5SQ13 230 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 AP1S3Q96PC3 154 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 LRRC30A6NM36 301 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 K7EQM0 130 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 FBLP22087 321 aaKnown RBP7.91□□□□□ -1.14
SF3A3-201ENST00000373019 GCHFRP30047 84 aa7.91□□□□□ -1.14
SF3A3-201ENST00000373019 IGHV1OR15-9A0A0B4J2B8 117 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 HELTA6NFD8 242 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 K7ESF4 209 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 GFRA3O60609 400 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 WISP2O76076 250 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 HBZP02008 142 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 FTH1P19P0C7X4 201 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 MGST1P10620 155 aaKnown RBP7.9□□□□□ -1.14
SF3A3-201ENST00000373019 IGFBP2P18065 325 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 GATA3P23771 443 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 SPATA46Q5T0L3 261 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 IBA57Q5T440 356 aaKnown RBP7.9□□□□□ -1.14
SF3A3-201ENST00000373019 SPATA31B1PQ5VZV4 182 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 HLA-DQA1Q5Y7H0 255 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 TPRX1Q8N7U7 411 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF837Q96EG3 531 aaPredicted RBP7.9□□□□□ -1.14
SF3A3-201ENST00000373019 MRAP2Q96G30 205 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 ZNF331Q9NQX6 463 aaPredicted RBP7.9□□□□□ -1.14
SF3A3-201ENST00000373019 HILPDAQ9Y5L2 63 aa7.9□□□□□ -1.14
SF3A3-201ENST00000373019 ASCC3Q8N3C0 2202 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms