RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TMEM167AQ8TBQ9 72 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 RARRES2Q99969 163 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 C20orf24Q9BUV8 137 aa20.23■□□□□ 0.83
CTSA-203ENST00000372459 GOSR1O95249 250 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 MBP02144 154 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 OPN1MWP04001 364 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 OPN1MW2P0DN77 364 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 OPN1MW3P0DN78 364 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 MBD3L1Q8WWY6 194 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 C12orf57Q99622 126 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 COMMD5Q9GZQ3 224 aa20.22■□□□□ 0.83
CTSA-203ENST00000372459 SMCO3A2RU48 225 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 M0R1W7 72 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 MPDU1O75352 247 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 CA2P00918 260 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 IGLV2-23P01705 113 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 MAS1LP35410 378 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 LGALS7P47929 136 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 VMA21Q3ZAQ7 101 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 PNKDQ8N490 385 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 Q8N7P7 452 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 OR4P4Q8NGL7 312 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 MALSU1Q96EH3 234 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 RCC1LQ96I51 464 aaKnown RBP20.21■□□□□ 0.83
CTSA-203ENST00000372459 INSIG2Q9Y5U4 225 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 ARF6P62330 175 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 ZNF726P1Q15940 193 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 ZNF506Q5JVG8 444 aa20.21■□□□□ 0.83
CTSA-203ENST00000372459 ENSAO43768 121 aaKnown RBP20.2■□□□□ 0.82
CTSA-203ENST00000372459 HSPB1P04792 205 aaKnown RBP20.2■□□□□ 0.82
CTSA-203ENST00000372459 RAB5AP20339 215 aa20.2■□□□□ 0.82
CTSA-203ENST00000372459 ATP5IP56385 69 aaPredicted RBP20.2■□□□□ 0.82
CTSA-203ENST00000372459 ACSM6Q6P461 480 aa20.2■□□□□ 0.82
CTSA-203ENST00000372459 OR1L8Q8NGR8 309 aa20.2■□□□□ 0.82
CTSA-203ENST00000372459 ISOC2Q96AB3 205 aa20.2■□□□□ 0.82
CTSA-203ENST00000372459 RPEQ96AT9 228 aa20.2■□□□□ 0.82
CTSA-203ENST00000372459 IGHV1-3A0A0C4DH29 117 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 FFAR4Q5NUL3 377 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 DCHS2Q6V1P9 2916 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 IGHV3-72A0A0B4J1Y9 119 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 C5orf52A6NGY3 159 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 SRP19P09132 144 aaKnown RBP20.19■□□□□ 0.82
CTSA-203ENST00000372459 MEOX2P50222 304 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 ZNF787Q6DD87 383 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 NDUFA4L2Q9NRX3 87 aa20.19■□□□□ 0.82
CTSA-203ENST00000372459 IGSF10Q6WRI0 2623 aa20.18■□□□□ 0.82
CTSA-203ENST00000372459 LCN15Q6UWW0 184 aa20.18■□□□□ 0.82
CTSA-203ENST00000372459 TREML4Q6UXN2 200 aa20.18■□□□□ 0.82
CTSA-203ENST00000372459 MOB3BQ86TA1 216 aa20.18■□□□□ 0.82
CTSA-203ENST00000372459 OVOL3O00110 214 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 UBE2CO00762 179 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 SOX15O60248 233 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 ICAM4Q14773 271 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 RPP25LQ8N5L8 163 aaKnown RBP20.17■□□□□ 0.82
CTSA-203ENST00000372459 NPVFQ9HCQ7 196 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 SIRT7Q9NRC8 400 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 IGKV1D-33P01593 117 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 IGKV1-33P01594 117 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 S100A6P06703 90 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 SNRPEP62304 92 aaKnown RBP20.17■□□□□ 0.82
CTSA-203ENST00000372459 SSX7Q7RTT5 188 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 OR11H6Q8NGC7 330 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 OR10G4Q8NGN3 311 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 OR10G9Q8NGN4 311 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 OR10G7Q8NGN6 311 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 CLDND2Q8NHS1 167 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 SLC39A9Q9NUM3 307 aa20.17■□□□□ 0.82
CTSA-203ENST00000372459 PUS1Q9Y606 427 aaKnown RBP eCLIP20.17■□□□□ 0.82
CTSA-203ENST00000372459 A0A1W2PN81 502 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 PCP4L1A6NKN8 68 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 LY6LH3BQJ8 138 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 SLC25A17O43808 307 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 CHRNA7P36544 502 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 HAGHQ16775 308 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 C2orf83Q53S99 150 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 YPEL4Q96NS1 127 aa20.16■□□□□ 0.82
CTSA-203ENST00000372459 ZNF430Q9H8G1 570 aaPredicted RBP20.16■□□□□ 0.82
CTSA-203ENST00000372459 MAP1LC3B2A6NCE7 125 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 INS-IGF2F8WCM5 200 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 PRTN3P24158 256 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 ERHP84090 104 aaKnown RBP20.15■□□□□ 0.82
CTSA-203ENST00000372459 BSXQ3C1V8 233 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 KHDC3LQ587J8 217 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 FAM24BQ8N5W8 94 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 TEX45Q8NA69 505 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 RITA1Q96K30 269 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 MAP1LC3BQ9GZQ8 125 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 CACNA1BQ00975 2339 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 TNCP24821 2201 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 FNDC10F2Z333 226 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 IGHV2-5P01817 119 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 S100A8P05109 93 aa20.15■□□□□ 0.82
CTSA-203ENST00000372459 ACOT6Q3I5F7 207 aaPredicted RBP20.15■□□□□ 0.82
CTSA-203ENST00000372459 A0A087WWC5 75 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 H3BQ15 152 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 EIF3GO75821 320 aaKnown RBP eCLIP20.14■□□□□ 0.81
CTSA-203ENST00000372459 HTR1DP28221 377 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 ARSJQ5FYB0 599 aaPredicted RBP20.14■□□□□ 0.81
CTSA-203ENST00000372459 C1orf122Q6ZSJ8 110 aa20.14■□□□□ 0.81
CTSA-203ENST00000372459 C1QL4Q86Z23 238 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms