RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 LSM10Q969L4 123 aaKnown RBP12.79□□□□□ -0.36
TMEM53-203ENST00000372242 SPIN2AQ99865 258 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 SPIN2BQ9BPZ2 258 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 MARVELD1Q9BSK0 173 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 HINT2Q9BX68 163 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 CACNG5Q9UF02 275 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 ZNF580Q9UK33 172 aa12.79□□□□□ -0.36
TMEM53-203ENST00000372242 ADAP1O75689 374 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 FGF2P09038 288 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 HOXB5P09067 269 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 NMSQ5H8A3 153 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 FOXA2Q9Y261 457 aaPredicted RBP12.78□□□□□ -0.36
TMEM53-203ENST00000372242 AREGP15514 252 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
TMEM53-203ENST00000372242 MITD1Q8WV92 249 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 FKBP11Q9NYL4 201 aa12.78□□□□□ -0.36
TMEM53-203ENST00000372242 ST8SIA3O43173 380 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 NXPH3O95157 252 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 IGHG4P01861 327 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 REG1AP05451 166 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 SPINK9Q5DT21 86 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 TEX38Q6PEX7 206 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 C19orf35Q6ZS72 473 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 UXS1Q8NBZ7 420 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 ZNF747Q9BV97 191 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 KLK15Q9H2R5 256 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 NDUFA4L2Q9NRX3 87 aa12.77□□□□□ -0.37
TMEM53-203ENST00000372242 DUXBA0A1W2PPF3 345 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 FBXO24O75426 580 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 IGLV1-40P01703 118 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 IL5P05113 134 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 GGNBP1Q5YKI7 109 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 ZNF429Q86V71 674 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 OR4X2Q8NGF9 303 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 OR5B3Q8NH48 314 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 CITED1Q99966 193 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 CITED2Q99967 270 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-203ENST00000372242 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-203ENST00000372242 IGLC7A0M8Q6 106 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 CCNKO75909 580 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 IFNA17P01571 189 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 SULT1A3P0DMM9 295 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 SULT1A4P0DMN0 295 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 PF4V1P10720 104 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 HSPE1P61604 102 aaKnown RBP12.76□□□□□ -0.37
TMEM53-203ENST00000372242 MS4A10Q96PG2 267 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 ZNF355PQ9NSJ1 428 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 ZNF257Q9Y2Q1 563 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
TMEM53-203ENST00000372242 PIGBOS1A0A0B4J2F0 54 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 DHFRP00374 187 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 PRH1P02810 166 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 RPLP1P05386 114 aaKnown RBP12.75□□□□□ -0.37
TMEM53-203ENST00000372242 PSMB8P28062 276 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 WT1-ASQ06250 92 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 SMCO1Q147U7 214 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 C12orf45Q8N5I9 185 aaPredicted RBP12.75□□□□□ -0.37
TMEM53-203ENST00000372242 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 COA4Q9NYJ1 87 aa12.75□□□□□ -0.37
TMEM53-203ENST00000372242 OR13C7P0DN81 318 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 CD83Q01151 205 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 FOXE3Q13461 319 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 KHDC1LQ5JSQ8 128 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 FAM110DQ8TAY7 271 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-203ENST00000372242 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 GPN1Q9HCN4 374 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-203ENST00000372242 A0A1B0GU03 582 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 TCRBV4S1A1TA0A5B7 111 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 CCSO14618 274 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 RGS13O14921 159 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 PRAF2O60831 178 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 ELANEP08246 267 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 PRCDQ00LT1 54 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 DEFA5Q01523 94 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-203ENST00000372242 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 COMMD1Q8N668 190 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 OR1S1Q8NH92 325 aa12.74□□□□□ -0.37
TMEM53-203ENST00000372242 IFNA21P01568 189 aa12.73□□□□□ -0.37
TMEM53-203ENST00000372242 PSMB6P28072 239 aa12.73□□□□□ -0.37
TMEM53-203ENST00000372242 RAB9AP51151 201 aa12.73□□□□□ -0.37
TMEM53-203ENST00000372242 TATDN3Q17R31 274 aa12.73□□□□□ -0.37
TMEM53-203ENST00000372242 AARDQ4LEZ3 155 aa12.73□□□□□ -0.37
TMEM53-203ENST00000372242 SHISA2Q6UWI4 295 aa12.73□□□□□ -0.37
TMEM53-203ENST00000372242 ST6GAL2Q96JF0 529 aa12.73□□□□□ -0.37
TMEM53-203ENST00000372242 NPIPB5A8MRT5 1133 aa12.72□□□□□ -0.37
TMEM53-203ENST00000372242 CTRB1P17538 263 aa12.72□□□□□ -0.37
TMEM53-203ENST00000372242 CTRB2Q6GPI1 263 aa12.72□□□□□ -0.37
TMEM53-203ENST00000372242 THOC7Q6I9Y2 204 aaKnown RBP12.72□□□□□ -0.37
TMEM53-203ENST00000372242 RNF152Q8N8N0 203 aa12.72□□□□□ -0.37
TMEM53-203ENST00000372242 OR10C1Q96KK4 312 aa12.72□□□□□ -0.37
TMEM53-203ENST00000372242 PLEKHA3Q9HB20 300 aa12.72□□□□□ -0.37
TMEM53-203ENST00000372242 SNRPGP15A8MWD9 76 aa12.72□□□□□ -0.37
TMEM53-203ENST00000372242 PITX3O75364 302 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms