RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SPP1P10451 314 aa21.08■□□□□ 0.96
ATPAF1-202ENST00000371937 PAX6P26367 422 aa21.08■□□□□ 0.96
ATPAF1-202ENST00000371937 BRS3P32247 399 aa21.08■□□□□ 0.96
ATPAF1-202ENST00000371937 CHRNA7P36544 502 aa21.08■□□□□ 0.96
ATPAF1-202ENST00000371937 MMDQ15546 238 aa21.08■□□□□ 0.96
ATPAF1-202ENST00000371937 SLC25A24Q6NUK1 477 aa21.08■□□□□ 0.96
ATPAF1-202ENST00000371937 CSMD2Q7Z408 3487 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 RNF223E7ERA6 249 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 INS-IGF2F8WCM5 200 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 RRHO14718 337 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 PJVKQ0ZLH3 352 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 EBI3Q14213 229 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 HNF4GQ14541 408 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 MRGPRG-AS1Q2M3A8 158 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 PIP4P2Q8N4L2 257 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 NPBQ8NG41 125 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 GNPNAT1Q96EK6 184 aaPredicted RBP21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 KIAA1456Q9P272 454 aa21.07■□□□□ 0.96
ATPAF1-202ENST00000371937 NBR2O15453 112 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 ATP6V1G1O75348 118 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 NPY1RP25929 384 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 PLGLAQ15195 96 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 SCGB1C1Q8TD33 95 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 FAM106CPP0CH98 169 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 ERHP84090 104 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 ETV3LQ6ZN32 361 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 PARD6GQ9BYG4 376 aaPredicted RBP21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 FBXL15Q9H469 300 aa21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 GCN1Q92616 2671 aaKnown RBP21.06■□□□□ 0.96
ATPAF1-202ENST00000371937 TRAV40A0A0B4J280 105 aa21.05■□□□□ 0.96
ATPAF1-202ENST00000371937 LINC00862A6NCI5 91 aa21.05■□□□□ 0.96
ATPAF1-202ENST00000371937 CD24P25063 80 aa21.05■□□□□ 0.96
ATPAF1-202ENST00000371937 MRPL41Q8IXM3 137 aaKnown RBP21.05■□□□□ 0.96
ATPAF1-202ENST00000371937 TMEM147Q9BVK8 224 aa21.05■□□□□ 0.96
ATPAF1-202ENST00000371937 NDUFA3O95167 84 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 IFNA4P05014 189 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 ATP6V0CP27449 155 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 SNCAP37840 140 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 TNXAQ16473 311 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 UQCC1Q9NVA1 299 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 FGF16O43320 207 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 CA2P00918 260 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 FAM157CP0CG43 387 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 SULT1A2P50226 295 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 OR10W1Q8NGF6 305 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 Q96MF0 132 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 GGACTQ9BVM4 153 aa21.04■□□□□ 0.96
ATPAF1-202ENST00000371937 E7EUB6 86 aa21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 J3QLI3 93 aa21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 RPL27AP46776 148 aaKnown RBP21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 COMPP49747 757 aaPredicted RBP21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 LRRC75BQ2VPJ9 315 aa21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 C10orf55Q5SWW7 151 aa21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 TMEM170AQ8WVE7 144 aa21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 SH3BGRL3Q9H299 93 aa21.03■□□□□ 0.96
ATPAF1-202ENST00000371937 VWC2Q2TAL6 325 aa21.02■□□□□ 0.96
ATPAF1-202ENST00000371937 BSXQ3C1V8 233 aa21.02■□□□□ 0.96
ATPAF1-202ENST00000371937 C2orf83Q53S99 150 aa21.02■□□□□ 0.96
ATPAF1-202ENST00000371937 Q8N6K4 173 aa21.02■□□□□ 0.96
ATPAF1-202ENST00000371937 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.02■□□□□ 0.965e-6■■■■□ 22.8
ATPAF1-202ENST00000371937 CGB1A6NKQ9 187 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 TMEM11P17152 192 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 RUSC1-AS1Q66K80 236 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 WDR61Q9GZS3 305 aaKnown RBP21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 IGHV3OR16-10A0A075B7F0 116 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 UBE2L5PA0A1B0GUS4 154 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 TGFAP01135 160 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 RAB5CP51148 216 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 KRTAP1-3Q8IUG1 177 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 MAPK1IP1LQ8NDC0 245 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 OR2G3Q8NGZ4 309 aa21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 SAT2Q96F10 170 aaPredicted RBP21.01■□□□□ 0.95
ATPAF1-202ENST00000371937 GNB1P62873 340 aa21■□□□□ 0.95
ATPAF1-202ENST00000371937 C5orf64Q2M2E5 130 aa21■□□□□ 0.95
ATPAF1-202ENST00000371937 C1RLQ9NZP8 487 aa21■□□□□ 0.95
ATPAF1-202ENST00000371937 ZNF705EA8MWA4 302 aaPredicted RBP20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 PRSS46E5RG02 174 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 IGHV4-38-2P0DP08 117 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 SUB1P53999 127 aaKnown RBP eCLIP20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 DLK1P80370 383 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 RUNX1Q01196 453 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 WT1-ASQ06250 92 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 TMEM249Q2WGJ8 235 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 BRD3OSQ6XYD6 125 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 TAF15Q92804 592 aaKnown RBP eCLIP20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 A0A1B0GW64 132 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 NCBP2LA6PVI3 153 aaKnown RBP20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 UMAD1C9J7I0 102 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 FCN1O00602 326 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 RNASE2P10153 161 aaKnown RBP20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 HSD17B13Q7Z5P4 300 aaPredicted RBP20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 MED9Q9NWA0 146 aa20.99■□□□□ 0.95
ATPAF1-202ENST00000371937 OR13C7P0DN81 318 aa20.98■□□□□ 0.95
ATPAF1-202ENST00000371937 IGHV4-31P0DP07 118 aa20.98■□□□□ 0.95
ATPAF1-202ENST00000371937 CXorf58Q96LI9 332 aa20.98■□□□□ 0.95
ATPAF1-202ENST00000371937 PSMG3Q9BT73 122 aaPredicted RBP20.98■□□□□ 0.95
ATPAF1-202ENST00000371937 PLA2G2EQ9NZK7 142 aa20.98■□□□□ 0.95
ATPAF1-202ENST00000371937 CNIH1O95406 144 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 BLOC1S1P78537 153 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 TUSC1Q2TAM9 212 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms