RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 BLCAPP62952 87 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 FXYD3Q14802 87 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 TMEM95Q3KNT9 176 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 C11orf87Q6NUJ2 197 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 C16orf82Q7Z2V1 217 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 OR10W1Q8NGF6 305 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 GRPEL2Q8TAA5 225 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 ZNF418Q8TF45 676 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-204ENST00000369462 SRSF12Q8WXF0 261 aaKnown RBP8.68□□□□□ -1.02
BRCC3-204ENST00000369462 HSPB9Q9BQS6 159 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 ZFP57Q9NU63 452 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 CACFD1Q9UGQ2 172 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 DNAJC9-AS1A6NH13 148 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 APELAP0DMC3 54 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 IAPPP10997 89 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 FGL1Q08830 312 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 C9orf152Q5JTZ5 239 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 THAP6Q8TBB0 222 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 DTD1Q8TEA8 209 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 FAM103A1Q9BTL3 118 aaKnown RBP8.67□□□□□ -1.02
BRCC3-204ENST00000369462 RNF126Q9BV68 326 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 ESM1Q9NQ30 184 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 NDUFA4L2Q9NRX3 87 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 OR5AC2Q9NZP5 309 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 MBD2Q9UBB5 411 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 IGHV7-81A0A0B4J1V7 117 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 A0A1B0GW64 132 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 MSGN1A6NI15 193 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 CGB1A6NKQ9 187 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 CRLF1O75462 422 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 MED6O75586 246 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 DEDDO75618 318 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 PET100P0DJ07 73 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 NDPQ00604 133 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 PRCDQ00LT1 54 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 TMEM86BQ8N661 226 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 ABHD5Q8WTS1 349 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 HEYLQ9NQ87 328 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-204ENST00000369462 TMEM50AO95807 157 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 FAM157CP0CG43 387 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 HOXA1P49639 335 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-204ENST00000369462 PDLIM3Q53GG5 364 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-204ENST00000369462 OR11H4Q8NGC9 324 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 PLEKHA3Q9HB20 300 aa8.67□□□□□ -1.02
BRCC3-204ENST00000369462 FXYD6-FXYD2A0A087WZ82 144 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 H3BP45 60 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 KCNAB3O43448 404 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 PRSS54Q6PEW0 395 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 Q6ZS46 218 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 ARPC1AQ92747 370 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 ENY2Q9NPA8 101 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 SETD2Q9BYW2 2564 aaPredicted RBP8.66□□□□□ -1.02
BRCC3-204ENST00000369462 L7N2F9 121 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 GPR137BO60478 399 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 PVALBP20472 110 aaPredicted RBP8.66□□□□□ -1.02
BRCC3-204ENST00000369462 VAMP2P63027 116 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 ZFP69Q49AA0 526 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 RAB40CQ96S21 281 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 PARP11Q9NR21 331 aa8.66□□□□□ -1.02
BRCC3-204ENST00000369462 C1QBP02746 253 aa8.65□□□□□ -1.02
BRCC3-204ENST00000369462 PAX9P55771 341 aa8.65□□□□□ -1.02
BRCC3-204ENST00000369462 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
BRCC3-204ENST00000369462 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
BRCC3-204ENST00000369462 HIPK2Q9H2X6 1198 aa8.65□□□□□ -1.02
BRCC3-204ENST00000369462 FBXO7Q9Y3I1 522 aa8.65□□□□□ -1.02
BRCC3-204ENST00000369462 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 TEX22C9J3V5 150 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 E5RGE8 158 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 REG1AP05451 166 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 OR13C7P0DN81 318 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 AREGP15514 252 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 VDAC2P45880 294 aaPredicted RBP8.65□□□□□ -1.03
BRCC3-204ENST00000369462 CAV2P51636 162 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 HILS1P60008 231 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 ZNF546Q86UE3 836 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 CIB3Q96Q77 187 aaPredicted RBP8.65□□□□□ -1.03
BRCC3-204ENST00000369462 PSENENQ9NZ42 101 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 WSB1Q9Y6I7 421 aa8.65□□□□□ -1.03
BRCC3-204ENST00000369462 A0A1W2PN81 502 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 IGLC7A0M8Q6 106 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 BOLA2-SMG1P6H3BVE0 249 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 TRIM77I1YAP6 450 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 EREGO14944 169 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 ATP6V0E1O15342 81 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 CHRNA7P36544 502 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 LFNGQ8NES3 379 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 SMIM8Q96KF7 97 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 NPFFR1Q9GZQ6 430 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 C11orf1Q9H5F2 150 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 LINC00527Q9UJ94 153 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 PAIP2BQ9ULR5 123 aaKnown RBP8.64□□□□□ -1.03
BRCC3-204ENST00000369462 CLDN34H7C241 214 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 IFNA10P01566 189 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 IGHG2P01859 326 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 HNRNPCP07910 306 aaKnown RBP eCLIP8.64□□□□□ -1.03
BRCC3-204ENST00000369462 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
BRCC3-204ENST00000369462 SLC25A4P12235 298 aa8.64□□□□□ -1.03
BRCC3-204ENST00000369462 SNCAP37840 140 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms