RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NPCDR1Q9BY65 106 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
SNX27-202ENST00000368841 A0A1B0GV90 55 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 DNM1P46Q6ZS02 220 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 ZNF414Q96IQ9 312 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.05
SNX27-202ENST00000368841 IGHV3-73A0A0B4J1V6 119 aa15.33■□□□□ 0.05
SNX27-202ENST00000368841 WISP3O95389 354 aaPredicted RBP15.33■□□□□ 0.05
SNX27-202ENST00000368841 TRBV7-9A0A0J9YWB2 115 aa15.33■□□□□ 0.05
SNX27-202ENST00000368841 REC114Q7Z4M0 266 aa15.33■□□□□ 0.05
SNX27-202ENST00000368841 LOXL4Q96JB6 756 aa15.33■□□□□ 0.05
SNX27-202ENST00000368841 ELOVL5Q9NYP7 299 aa15.33■□□□□ 0.05
SNX27-202ENST00000368841 C10orf126Q8N4M7 172 aa15.33■□□□□ 0.04
SNX27-202ENST00000368841 GP6Q9HCN6 339 aa15.33■□□□□ 0.04
SNX27-202ENST00000368841 FBLN7Q53RD9 439 aa15.33■□□□□ 0.04
SNX27-202ENST00000368841 ZNF703Q9H7S9 590 aaPredicted RBP15.33■□□□□ 0.04
SNX27-202ENST00000368841 CD7P09564 240 aa15.33■□□□□ 0.04
SNX27-202ENST00000368841 NUTF2P61970 127 aaKnown RBP15.32■□□□□ 0.04
SNX27-202ENST00000368841 MT-ND6P03923 174 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 MSGN1A6NI15 193 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 NPIPB4C9JG80 1138 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 TNFSF10P50591 281 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 Q6ZT83 130 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 OR4X2Q8NGF9 303 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 MRPS16Q9Y3D3 137 aaKnown RBP15.32■□□□□ 0.04
SNX27-202ENST00000368841 C12orf77C9JDV5 145 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 FXYD7P58549 80 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 TCF23Q7RTU1 214 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 SSBP4Q9BWG4 385 aaPredicted RBP15.32■□□□□ 0.04
SNX27-202ENST00000368841 CFAP161Q6P656 301 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 SMIM8Q96KF7 97 aa15.32■□□□□ 0.04
SNX27-202ENST00000368841 LDLRAD2Q5SZI1 272 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 LEPP41159 167 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 SPSB2Q99619 263 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 C12orf54Q6X4T0 127 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 KNL1Q8NG31 2342 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 IGHV2OR16-5A0A0B4J2B6 119 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 CKAP5Q14008 2032 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 ZNF98A6NK75 572 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 C1QTNF12Q5T7M4 302 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 MRPL32Q9BYC8 188 aaKnown RBP15.31■□□□□ 0.04
SNX27-202ENST00000368841 Q9H3A6 140 aa15.31■□□□□ 0.04
SNX27-202ENST00000368841 CHCHD2Q9Y6H1 151 aaPredicted RBP15.31■□□□□ 0.04
SNX27-202ENST00000368841 C1QTNF9BB2RNN3 333 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 IFNL4K9M1U5 179 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 C9orf106Q8NAJ2 232 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 C1orf162Q8NEQ5 155 aaPredicted RBP15.3■□□□□ 0.04
SNX27-202ENST00000368841 MYOFQ9NZM1 2061 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 COL11A2P13942 1736 aaPredicted RBP15.3■□□□□ 0.04
SNX27-202ENST00000368841 EFEMP2O95967 443 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 POC1AQ8NBT0 407 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 PLSCR2Q9NRY7 297 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 NBEAP1P0C6P0 100 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 COL4A5P29400 1685 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 ERVH48-1M5A8F1 160 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 IFI27L2Q9H2X8 130 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
SNX27-202ENST00000368841 NPIPB8E9PQR5 432 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 NPIPB9F8W1W9 429 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 NPIPB7O75200 414 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 RNASE7Q9H1E1 156 aaKnown RBP15.29■□□□□ 0.04
SNX27-202ENST00000368841 DANCRP0C864 163 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 SDF2L1Q9HCN8 221 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 LOC390937A0A1W2PQ73 354 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 IGHMP01871 453 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 TXNDC17Q9BRA2 123 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 COPS9Q8WXC6 57 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 ANKRD36A6QL64 1941 aa15.29■□□□□ 0.04
SNX27-202ENST00000368841 SAXO1Q8IYX7 474 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 ALX4Q9H161 411 aaPredicted RBP15.28■□□□□ 0.04
SNX27-202ENST00000368841 DDTP30046 118 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 TMEM42Q69YG0 159 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 BRWD1Q9NSI6 2320 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 GREM1O60565 184 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 C1orf100Q5SVJ3 147 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 C21orf62Q9NYP8 219 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 UNC13CQ8NB66 2214 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 TGFBR3LH3BV60 316 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 TEX29Q8N6K0 151 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 OR10J3Q5JRS4 329 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 FAM169BQ8N8A8 192 aa15.28■□□□□ 0.04
SNX27-202ENST00000368841 SPAG8Q99932 426 aaPredicted RBP15.28■□□□□ 0.04
SNX27-202ENST00000368841 TCRBV4S1A1TA0A5B7 111 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 ZNF708P17019 499 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 JMJD8Q96S16 334 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 CNTFRP26992 372 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 C2orf68Q2NKX9 166 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 FAM89BQ8N5H3 189 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 DPM3Q9P2X0 92 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 CD55P08174 381 aa15.27■□□□□ 0.04
SNX27-202ENST00000368841 RAMP3O60896 148 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 OR52E5Q8NH55 327 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 A0A087WV48 116 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 TBR1Q16650 682 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 SMIM10L1P0DMW3 83 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 TMEM219Q86XT9 240 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 GATAD1Q8WUU5 269 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 SMIM10Q96HG1 83 aa15.27■□□□□ 0.03
SNX27-202ENST00000368841 SAA2-SAA4A0A096LPE2 208 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 DPRXA6NFQ7 191 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms