RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 IGLC7A0M8Q6 106 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 UPK2O00526 184 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 S1PR2O95136 353 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 HPRT1P00492 218 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 CLEC2LP0C7M8 214 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 NQO2P16083 231 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 APOC4P55056 127 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 TAS2R31P59538 309 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 GABARAPL2P60520 117 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 EWSR1Q01844 656 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLRN3-201ENST00000368671 MXD1Q05195 221 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 UBE2UQ5VVX9 321 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 TPRA1Q86W33 373 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 HOGA1Q86XE5 327 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 SLC38A6Q8IZM9 456 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 OR2C3Q8N628 320 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 ZBTB34Q8NCN2 500 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 DMBX1Q8NFW5 382 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 OR10W1Q8NGF6 305 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 OR5H6Q8NGV6 325 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 OR51H1Q8NH63 302 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 TMEM140Q9NV12 185 aa7.7□□□□□ -1.18
CLRN3-201ENST00000368671 PLECQ15149 4684 aaKnown RBP7.7□□□□□ -1.18
CLRN3-201ENST00000368671 IGHV3-21A0A0B4J1V1 117 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 MEIS3P1A6NDR6 274 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 NUPR2A6NF83 97 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 RBFOX2O43251 390 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLRN3-201ENST00000368671 TGOLN2O43493 480 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 SPRY2O43597 315 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 SDC2P34741 201 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 ELLP55199 621 aaPredicted RBP7.69□□□□□ -1.18
CLRN3-201ENST00000368671 MSMO1Q15800 293 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 DEFB135Q30KP9 77 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 IDNKQ5T6J7 187 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 AADACL3Q5VUY0 350 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 SLC25A24Q6NUK1 477 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 ZNF773Q6PK81 442 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 ZNF818PQ6ZRF7 136 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 LYG2Q86SG7 212 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 TMEM17Q86X19 198 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 SPARTQ8N0X7 666 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 SPAG8Q99932 426 aaPredicted RBP7.69□□□□□ -1.18
CLRN3-201ENST00000368671 ZNF436Q9C0F3 470 aaPredicted RBP7.69□□□□□ -1.18
CLRN3-201ENST00000368671 RNF167Q9H6Y7 350 aa7.69□□□□□ -1.18
CLRN3-201ENST00000368671 IGHV3OR16-8A0A075B7F1 116 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 OR2T8A6NH00 312 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 CYB5BO43169 146 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 MRPS14O60783 128 aaKnown RBP7.68□□□□□ -1.18
CLRN3-201ENST00000368671 TRAPPC2P0DI81 140 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 TRAPPC2BP0DI82 140 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 OR13C7P0DN81 318 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 RPL35AP18077 110 aaKnown RBP7.68□□□□□ -1.18
CLRN3-201ENST00000368671 PTBP1P26599 531 aaKnown RBP eCLIP7.68□□□□□ -1.18
CLRN3-201ENST00000368671 BMI1P35226 326 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 POU2AF1Q16633 256 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 GDPD1Q8N9F7 314 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 VN1R17PQ8TDU5 208 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 RNF141Q8WVD5 230 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 TMEM190Q8WZ59 177 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 FCGR1BQ92637 280 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 SLC25A38Q96DW6 304 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
CLRN3-201ENST00000368671 C20orf24Q9BUV8 137 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 HINT2Q9BX68 163 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 QTRT1Q9BXR0 403 aaKnown RBP7.68□□□□□ -1.18
CLRN3-201ENST00000368671 C5orf66Q9H5L9 145 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 RAB26Q9ULW5 256 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 TP53TG1Q9Y2A0 90 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 ETV7Q9Y603 341 aa7.68□□□□□ -1.18
CLRN3-201ENST00000368671 TEX50A0A1B0GTY4 177 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 TSPAN4O14817 238 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 PAX4O43316 350 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 ZNF207O43670 478 aaKnown RBP7.67□□□□□ -1.18
CLRN3-201ENST00000368671 HERV-K104P61576 105 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 ERVK-16P61578 105 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 WT1-ASQ06250 92 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 TNFRSF9Q07011 255 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 THOC7Q6I9Y2 204 aaKnown RBP7.67□□□□□ -1.18
CLRN3-201ENST00000368671 LAMTOR1Q6IAA8 161 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
CLRN3-201ENST00000368671 Q6ZWC4 215 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 STPG3Q8N7X2 389 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 UBAC2Q8NBM4 344 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 OR5AP2Q8NGF4 316 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 OR5B3Q8NH48 314 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 AUNIPQ9H7T9 357 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 PLEKHA2Q9HB19 425 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 DAZ1Q9NQZ3 744 aaKnown RBP7.67□□□□□ -1.18
CLRN3-201ENST00000368671 DIABLOQ9NR28 239 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 COMMD9Q9P000 198 aa7.67□□□□□ -1.18
CLRN3-201ENST00000368671 LOC100506127A0A0U1RQW1 187 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 OR4C46A6NHA9 309 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 H3BS24 57 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 NDUFA4O00483 81 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 UBE2CO00762 179 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 RLN1P04808 185 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 SERPINE2P07093 398 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 CTSDP07339 412 aaPredicted RBP7.66□□□□□ -1.18
CLRN3-201ENST00000368671 CBX5P45973 191 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms