RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TMEM42Q69YG0 159 aa14.19□□□□□ -0.14
NID1-202ENST00000366595 GP6Q9HCN6 339 aa14.19□□□□□ -0.14
NID1-202ENST00000366595 FBXL7Q9UJT9 491 aa14.19□□□□□ -0.14
NID1-202ENST00000366595 ATP5G3P48201 142 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 TGIF1Q15583 401 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 TMEM249Q2WGJ8 235 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 NUP98P52948 1817 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 NUP205Q92621 2012 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 TMEM238C9JI98 176 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 PLCH1Q4KWH8 1693 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 UBE2CO00762 179 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 ATP5L2Q7Z4Y8 100 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 DPM3Q9P2X0 92 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 M0R2P5 195 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 IGKV3-20P01619 116 aa14.18□□□□□ -0.14
NID1-202ENST00000366595 CHTOPQ9Y3Y2 248 aaKnown RBP14.18□□□□□ -0.14
NID1-202ENST00000366595 MAP1BP46821 2468 aaKnown RBP14.18□□□□□ -0.14
NID1-202ENST00000366595 TMEM144Q7Z5S9 345 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 TMEM54Q969K7 222 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 GPHA2Q96T91 129 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 LAMA4Q16363 1823 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 DDX60Q8IY21 1712 aaKnown RBP14.17□□□□□ -0.14
NID1-202ENST00000366595 RIPPLY3P57055 190 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 MRPL52Q86TS9 123 aaKnown RBP14.17□□□□□ -0.14
NID1-202ENST00000366595 PLPPR1Q8TBJ4 325 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 TTC3P53804 2025 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 ZNF688P0C7X2 276 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 TFF3Q07654 80 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 ZNF525Q8N782 197 aa14.17□□□□□ -0.14
NID1-202ENST00000366595 NAPSAO96009 420 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 ADMP35318 185 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.16□□□□□ -0.14
NID1-202ENST00000366595 PVRIGQ6DKI7 326 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 NR2C2APQ86WQ0 139 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 PILRAQ9UKJ1 303 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 TRAV2A0A0B4J234 112 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 DUSP14O95147 198 aaKnown RBP14.16□□□□□ -0.14
NID1-202ENST00000366595 LY6EQ16553 131 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 FAM90A1Q86YD7 464 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 FOXD3Q9UJU5 478 aaPredicted RBP14.16□□□□□ -0.14
NID1-202ENST00000366595 A0A1W2PRE2 83 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 MSGN1A6NI15 193 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 ZP1P60852 638 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 LINC01590Q5TEZ4 76 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 TNFSF13O75888 250 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 FOXA2Q9Y261 457 aaPredicted RBP14.16□□□□□ -0.14
NID1-202ENST00000366595 MYOD1P15172 320 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 LEAP2Q969E1 77 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 LINC01587Q99440 93 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 PILRBQ9UKJ0 227 aa14.16□□□□□ -0.14
NID1-202ENST00000366595 SPAG17Q6Q759 2223 aa14.15□□□□□ -0.14
NID1-202ENST00000366595 TRGV2A0A075B6R0 118 aa14.15□□□□□ -0.14
NID1-202ENST00000366595 F2Z2F3 143 aa14.15□□□□□ -0.14
NID1-202ENST00000366595 ITGBL1O95965 494 aaPredicted RBP14.15□□□□□ -0.14
NID1-202ENST00000366595 SAA1P0DJI8 122 aaPredicted RBP14.15□□□□□ -0.14
NID1-202ENST00000366595 TMEM242Q9NWH2 141 aa14.15□□□□□ -0.14
NID1-202ENST00000366595 PEMTQ9UBM1 199 aa14.15□□□□□ -0.14
NID1-202ENST00000366595 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
NID1-202ENST00000366595 PPP1R27Q86WC6 154 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 MIR17HGQ75NE6 70 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 IFI27L1Q96BM0 104 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 NRTNQ99748 197 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 C12orf77C9JDV5 145 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 RNASE4P34096 147 aaKnown RBP14.14□□□□□ -0.15
NID1-202ENST00000366595 RPL39P5Q59GN2 51 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 RNF222A6NCQ9 220 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 TOMM40O96008 361 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 ACP7Q6ZNF0 438 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 ARPC1AQ92747 370 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 KNTC1P50748 2209 aa14.14□□□□□ -0.15
NID1-202ENST00000366595 RAMP1O60894 148 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 RP1L1Q8IWN7 2480 aaPredicted RBP14.13□□□□□ -0.15
NID1-202ENST00000366595 KLF4O43474 513 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 RHOGP84095 191 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 EGR4Q05215 589 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 PRSS53Q2L4Q9 553 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 DTX2Q86UW9 622 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 ASCC3Q8N3C0 2202 aaKnown RBP14.13□□□□□ -0.15
NID1-202ENST00000366595 NRN1LQ496H8 165 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 ITLN2Q8WWU7 325 aaPredicted RBP14.13□□□□□ -0.15
NID1-202ENST00000366595 IGHV3-48P01763 117 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 FGF11Q92914 225 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 PLEKHB2Q96CS7 222 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 SPANXDQ9BXN6 97 aa14.13□□□□□ -0.15
NID1-202ENST00000366595 GLRXP35754 106 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 TRGV11A0A075B6L2 103 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BKO60814 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BJP06899 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BOP23527 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BBP33778 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BDP58876 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BCP62807 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST2H2BEQ16778 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BHQ93079 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BNQ99877 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 HIST1H2BMQ99879 126 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 SEPSECSQ9HD40 501 aaKnown RBP14.12□□□□□ -0.15
NID1-202ENST00000366595 EPDR1Q9UM22 224 aa14.12□□□□□ -0.15
NID1-202ENST00000366595 CD28P10747 220 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms