RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 DCUN1D1Q96GG9 259 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 PRTFDC1Q9NRG1 225 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 PKIGQ9Y2B9 76 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 SAMHD1Q9Y3Z3 626 aaKnown RBP1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 TIMM22Q9Y584 194 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 ITGB4P16144 1822 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 NCOA1Q15788 1441 aa1.49□□□□□ -2.17
RNU6-28P-201ENST00000362378 NUP155O75694 1391 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 FLT4P35916 1363 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 A0A1B0GVG6 124 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 J3QKU1 62 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 OVOL1O14753 267 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 IGHV3-7P01780 117 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 TTRP02766 147 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 IGKV1-16P04430 117 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 PRM2P04554 102 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 SERPINA7P05543 415 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 RPL5P46777 297 aaKnown RBP1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 EVX1P49640 407 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 AP3S2P59780 193 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 ERVS71-1P61550 626 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 EDDM3AQ14507 147 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 IBA57Q5T440 356 aaKnown RBP1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 C9orf64Q5T6V5 341 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 TMEM42Q69YG0 159 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 LPCAT3Q6P1A2 487 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 ACOT12Q8WYK0 555 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 TSPAN32Q96QS1 320 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 DOHHQ9BU89 302 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 CHST6Q9GZX3 395 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 NAT8Q9UHE5 227 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 PCNX2A6NKB5 2137 aa1.48□□□□□ -2.17
RNU6-28P-201ENST00000362378 DISP1Q96F81 1524 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 A0A087WUJ7 227 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 IRGMA1A4Y4 181 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 GGT3PA6NGU5 568 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 TMEM210A6NLX4 147 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 FAAHO00519 579 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 FADS1O60427 444 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 PGLYRP1O75594 196 aaPredicted RBP1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 NAPSAO96009 420 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 IGKV1-5P01602 117 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 SULT1A3P0DMM9 295 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 SULT1A4P0DMN0 295 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 DEFA4P12838 97 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 KCNJ8Q15842 424 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 LRRC28Q86X40 367 aaPredicted RBP1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 ZNF676Q8N7Q3 588 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 OR8B12Q8NGG6 310 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 ITFG2Q969R8 447 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 NIPSNAP1Q9BPW8 284 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 FBXL12Q9NXK8 326 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 SCAF11Q99590 1463 aaKnown RBP1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 MPDZO75970 2070 aa1.47□□□□□ -2.17
RNU6-28P-201ENST00000362378 PTPRSQ13332 1948 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 IGKV1D-43A0A0B4J1Z2 117 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 TRAV26-2A0A0B4J265 109 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 A0A0D9SEW6 157 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 OR51F1A6NGY5 319 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 OR4C46A6NHA9 309 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 FABP5P3A8MUU1 101 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 CNIH1O95406 144 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HAND1O96004 215 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 C1QCP02747 245 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 PPBPP02775 128 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H2BOP23527 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HOXA6P31267 233 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H2BBP33778 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H2BDP58876 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 RPS20P60866 119 aaKnown RBP1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H2BCP62807 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 SLC38A11Q08AI6 406 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 STX5Q13190 355 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST2H2BEQ16778 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 FAM27BQ5VT28 67 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 ANKRD29Q8N6D5 301 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 OR13C4Q8NGS5 318 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H2BHQ93079 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 BORCS7Q96B45 105 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H2BNQ99877 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H2BMQ99879 126 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 HSPB9Q9BQS6 159 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 DERL1Q9BUN8 251 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 ULBP3Q9BZM4 244 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 COMMD5Q9GZQ3 224 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 TLNRD1Q9H1K6 362 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 DCSTAMPQ9H295 470 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 TMEM56-RWDD3S4R434 201 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 RALGAPA2Q2PPJ7 1873 aa1.46□□□□□ -2.18
RNU6-28P-201ENST00000362378 NCKAP5O14513 1909 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 TRBV10-2A0A0K0K1G8 114 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 HMSDA8MTL9 139 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 TRAPPC2LH3BP13 241 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 SLC22A1O15245 554 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 IFNA6P05013 189 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 NFYAP23511 347 aaPredicted RBP1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 HIST1H3AP68431 136 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 HBA1P69905 142 aa1.45□□□□□ -2.18
RNU6-28P-201ENST00000362378 MRPS15P82914 257 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 724.6 ms