RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 TMEM167AQ8TBQ9 72 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 IFITM10A6NMD0 228 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 C17orf98A8MV24 154 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 RRHO14718 337 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 PAPPA-AS1Q5QFB9 102 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 WDR82Q6UXN9 313 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 WBP1Q96G27 269 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 ATG101Q9BSB4 218 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 PLXNA1Q9UIW2 1896 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 C1QTNF9BB2RNN3 333 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 H7C2G1 150 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 CIDEAO60543 219 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 NPIPB7O75200 414 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 C1QTNF9P0C862 333 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 CD33P20138 364 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 RNASE4P34096 147 aaKnown RBP8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 TEX45Q8NA69 505 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 TCF24Q7RTU0 167 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 SPSB4Q96A44 273 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 C5orf66Q9H5L9 145 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 K7ENP7 123 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 SULT1A2P50226 295 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 RHOGP84095 191 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 MRAP2Q96G30 205 aa8.87□□□□□ -0.99
CACNA1S-201ENST00000362061 TRAV24A0A0B4J272 114 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 TIMM23O14925 209 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 COL25A1Q9BXS0 654 aaPredicted RBP8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 SLC25A16P16260 332 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 TMEM187Q14656 261 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 C12orf57Q99622 126 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 CCDC88CQ9P219 2028 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 C1QL1O75973 258 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 LGALS3P17931 250 aaKnown RBP8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 FLVCR1-AS1Q8TAF5 88 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 BET1LQ9NYM9 111 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 CKAP5Q14008 2032 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 IGLV3-32A0A0A0MS00 114 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 ERVH48-1M5A8F1 160 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 NBEAP1P0C6P0 100 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 Q6ZS92 163 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 TP53RKQ96S44 253 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 TRBV20OR9-2A0A075B6H5 130 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 SAA2-SAA4A0A096LPE2 208 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 SAA2P0DJI9 122 aaPredicted RBP8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 FAM209BQ5JX69 171 aa8.86□□□□□ -0.99
CACNA1S-201ENST00000362061 ABCA4P78363 2273 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 RPS11P62280 158 aaKnown RBP eCLIP8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 VMO1Q7Z5L0 202 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 PPP1R3EQ9H7J1 279 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 TRAV14DV4A0A0A6YYC5 116 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 PQLC2LA1A4F0 135 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 TFF1P04155 84 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 SAA1P0DJI8 122 aaPredicted RBP8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 BRD3OSQ6XYD6 125 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 TMEM219Q86XT9 240 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 OR13C6PQ8NH95 151 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 RBM38Q9H0Z9 239 aaKnown RBP8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 ESPL1Q14674 2120 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 RBFOX2O43251 390 aaKnown RBP eCLIP8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 HLA-DRB1P01911 266 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 IL6RP08887 468 aaPredicted RBP8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 COX6CP09669 75 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 GLMPQ8WWB7 406 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 CRIM1Q9NZV1 1036 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 SCN2AQ99250 2005 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 PLPPR1Q8TBJ4 325 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 SDF2L1Q9HCN8 221 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 SDK2Q58EX2 2172 aa8.85□□□□□ -0.99
CACNA1S-201ENST00000362061 MT-ND6P03923 174 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 HINT1P49773 126 aaPredicted RBP8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 COPS9Q8WXC6 57 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 BRCA1P38398 1863 aaKnown RBP8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 C7orf66A4D0T2 115 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 RNF223E7ERA6 249 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 ZP1P60852 638 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 ZNF585BQ52M93 769 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 LINC01356Q8N9X3 169 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 PRO1933Q9H354 126 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 LEMD1Q68G75 181 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 SIGIRRQ6IA17 410 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 TM2D1Q9BX74 207 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 TRAV41A0A0B4J266 112 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 H3BUX3 64 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 GCHFRP30047 84 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 Q0VFX4 171 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 ARL6IP6Q8N6S5 226 aa8.84□□□□□ -0.99
CACNA1S-201ENST00000362061 IGFBP2P18065 325 aa8.84□□□□□ -1
CACNA1S-201ENST00000362061 FAM3BP58499 235 aaPredicted RBP8.84□□□□□ -1
CACNA1S-201ENST00000362061 C9orf62Q8N4C0 152 aa8.84□□□□□ -1
CACNA1S-201ENST00000362061 RNASEH2CQ8TDP1 164 aaKnown RBP8.84□□□□□ -1
CACNA1S-201ENST00000362061 VGLL1Q99990 258 aa8.84□□□□□ -1
CACNA1S-201ENST00000362061 YPEL1O60688 119 aa8.83□□□□□ -1
CACNA1S-201ENST00000362061 PAX1P15863 534 aa8.83□□□□□ -1
CACNA1S-201ENST00000362061 Q5PR19 223 aa8.83□□□□□ -1
CACNA1S-201ENST00000362061 YPEL2Q96QA6 119 aa8.83□□□□□ -1
CACNA1S-201ENST00000362061 TRGV4A0A0C4DH28 118 aa8.83□□□□□ -1
CACNA1S-201ENST00000362061 SIGLEC5O15389 551 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms