RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 LY86O95711 162 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 G6PCP35575 357 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 RAB7AP51149 207 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 ZNF816Q0VGE8 651 aaPredicted RBP10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 OR2B11Q5JQS5 317 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 TMEM200BQ69YZ2 307 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 SPNS3Q6ZMD2 512 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 ZNF66Q6ZN08 573 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 H2BFWTQ7Z2G1 175 aa10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 RPP25LQ8N5L8 163 aaKnown RBP10.77□□□□□ -0.69
SQSTM1-201ENST00000360718 PTPN13Q12923 2485 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 KBTBD11O94819 623 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 P0C879 139 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 SSTP61278 116 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 OR10G9Q8NGN4 311 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 OR10G7Q8NGN6 311 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 DTD1Q8TEA8 209 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 VPS13CQ709C8 3753 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 POLQO75417 2590 aa10.76□□□□□ -0.69
SQSTM1-201ENST00000360718 IFITM10A6NMD0 228 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 ITGB1BP1O14713 200 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 RAMP3O60896 148 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 FGF7P21781 194 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 GPR12P47775 334 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 EIF4EBP1Q13541 118 aaPredicted RBP10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 ADIRFQ15847 76 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 PYY3Q5JQD4 70 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 HIST3H2BBQ8N257 126 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 OR10D4PQ8NGN7 298 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 FRZBQ92765 325 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 OR5B12Q96R08 314 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 PFDN5Q99471 154 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 ARHGAP32A7KAX9 2087 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 ST8SIA5O15466 376 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 S1PR2O95136 353 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 RPL30P62888 115 aaKnown RBP10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 BSXQ3C1V8 233 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 PRAMEF5Q5TYX0 476 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 ZNF841Q6ZN19 808 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 ABHD5Q8WTS1 349 aa10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 HSD17B10Q99714 261 aaKnown RBP10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 RPUSD1Q9UJJ7 312 aaKnown RBP10.75□□□□□ -0.69
SQSTM1-201ENST00000360718 ABCA12Q86UK0 2595 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 GCN1Q92616 2671 aaKnown RBP10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 SOX15O60248 233 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 RBMXL2O75526 392 aaKnown RBP10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 CCL3L1P16619 93 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 GNB2P62879 340 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 FFAR4Q5NUL3 377 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 ACSM6Q6P461 480 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 SRD5A3Q9H8P0 318 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 PATZ1Q9HBE1 687 aaKnown RBP10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 PITPNC1Q9UKF7 332 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 MAP1AP78559 2803 aaPredicted RBP10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 C17orf98A8MV24 154 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 MMP23AO75900 390 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 IGKV1D-33P01593 117 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 IGKV1-33P01594 117 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 IGHV3-7P01780 117 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 IGHV4-39P01824 125 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 DEFA6Q01524 100 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 GPR61Q9BZJ8 451 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 MED13LQ71F56 2210 aa10.74□□□□□ -0.69
SQSTM1-201ENST00000360718 PMS2P5A8MQ11 134 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 H7BYZ3 331 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 PDLIM4P50479 330 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 RPP30P78346 268 aaKnown RBP10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 VWC2Q2TAL6 325 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 ACOT6Q3I5F7 207 aaPredicted RBP10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 Q3ZCU0 254 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 LEAP2Q969E1 77 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 SLC25A22Q9H936 323 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 SMCO3A2RU48 225 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 C16orf82Q7Z2V1 217 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 ZNF383Q8NA42 475 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 OR4F5Q8NH21 305 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 C5orf30Q96GV9 206 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 OR4F4Q96R69 305 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 SSBP3Q9BWW4 388 aaPredicted RBP10.73□□□□□ -0.69
SQSTM1-201ENST00000360718 PPIAL4CA0A0B4J2A2 164 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 PPIAL4GP0DN37 164 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 GALR1P47211 349 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 GNG10P50151 68 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 ZNF134P52741 427 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 KRTAP10-9P60411 292 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 RPL23P62829 140 aaKnown RBP10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 CT45A1Q5HYN5 189 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 BTNL3Q6UXE8 466 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 CT45A3Q8NHU0 189 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 RAB24Q969Q5 203 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 NPCDR1Q9BY65 106 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 PARLQ9H300 379 aa10.72□□□□□ -0.69
SQSTM1-201ENST00000360718 PPP5D1E7EU14 171 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms