RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 GAB2Q9UQC2 676 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 TMEM250H0YL14 139 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 PHOX2AO14813 284 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 CYB5BO43169 146 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 RBFOX2O43251 390 aaKnown RBP eCLIP5.98□□□□□ -1.451e-9■■■■■ 33.1
CLCN3-202ENST00000360642 HIST1H2BKO60814 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 S100A9P06702 114 aaKnown RBP5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BJP06899 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BOP23527 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BBP33778 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 GLRXP35754 106 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 GPR12P47775 334 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BDP58876 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BCP62807 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST2H2BEQ16778 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 FFAR4Q5NUL3 377 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-202ENST00000360642 ZADH2Q8N4Q0 377 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 OR52E5Q8NH55 327 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BHQ93079 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 S100PBPQ96BU1 408 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BNQ99877 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 HIST1H2BMQ99879 126 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 IFI27L2Q9H2X8 130 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 OR6C3Q9NZP0 311 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 FAM215AQ9Y5M1 114 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 INTS1Q8N201 2190 aaKnown RBP5.98□□□□□ -1.45
CLCN3-202ENST00000360642 CUL9Q8IWT3 2517 aa5.98□□□□□ -1.45
CLCN3-202ENST00000360642 KALRNO60229 2985 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 IGLV3-9A0A075B6K5 115 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 TRBV24-1A0A075B6N3 115 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 A6NNC1 897 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 ITGB1BP1O14713 200 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 FCGR3BO75015 233 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 IGHV3-7P01780 117 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 CDX1P47902 265 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-202ENST00000360642 ZNF83P51522 516 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 SPINK9Q5DT21 86 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 NCMAPQ5T1S8 102 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 CYP2G1PQ6ZSU1 146 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 ZNRF1Q8ND25 227 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 FAM222BQ8WU58 562 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 DDB2Q92466 427 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 OR2V2Q96R30 315 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 ACTR3CQ9C0K3 210 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-202ENST00000360642 SLC25A22Q9H936 323 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 DOK5Q9P104 306 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 NAT8Q9UHE5 227 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 ROS1P08922 2347 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 IGHV3OR15-7A0A075B7D8 119 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 PRSS46E5RG02 174 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 HMGB3O15347 200 aaKnown RBP5.97□□□□□ -1.45
CLCN3-202ENST00000360642 KBTBD11O94819 623 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 TRGC2P03986 189 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 PSMB3P49720 205 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 SPCS3P61009 180 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 LTC4SQ16873 150 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 C17orf58Q2M2W7 97 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 TMEM249Q2WGJ8 235 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 FAM210BQ96KR6 192 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 SSX3Q99909 188 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 MANBALQ9NQG1 85 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 GNG12Q9UBI6 72 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 WDR83OSQ9Y284 106 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 ZFHX2Q9C0A1 2572 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-202ENST00000360642 SEC14L6B5MCN3 397 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 RBMXL2O75526 392 aaKnown RBP5.97□□□□□ -1.45
CLCN3-202ENST00000360642 YIF1AO95070 293 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 CD1BP29016 333 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 VDAC2P45880 294 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-202ENST00000360642 TMEM241Q24JQ0 296 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 KRTCAP3Q53RY4 240 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 RPL39P5Q59GN2 51 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 UTF1Q5T230 341 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 Q6ZS92 163 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 C1orf87Q8N0U7 546 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 RPRMLQ8N4K4 120 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 GATAD1Q8WUU5 269 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 GSN-AS1Q9NRJ2 163 aa5.97□□□□□ -1.45
CLCN3-202ENST00000360642 C17orf112F2Z3M2 114 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 M0R1B8 84 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 OPN1MWP04001 364 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 OPN1MW2P0DN77 364 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 OPN1MW3P0DN78 364 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 COL8A2P25067 703 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 TIMP3P35625 211 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 KLF3P57682 345 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-202ENST00000360642 C8orf49Q96NF6 230 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 SMIM7Q9BQ49 75 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 PYGO2Q9BRQ0 406 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 DOCK11Q5JSL3 2073 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 BSNQ9UPA5 3926 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 OTOGLQ3ZCN5 2332 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 PIEZO2Q9H5I5 2752 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 M0R1X1 148 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 SLC31A2O15432 143 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 TGOLN2O43493 480 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 SOX15O60248 233 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 CRYAAP02489 173 aa5.96□□□□□ -1.46
CLCN3-202ENST00000360642 PFN1P07737 140 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms