RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 OR10A7Q8NGE5 316 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 CCL17Q92583 94 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 GNPNAT1Q96EK6 184 aaPredicted RBP11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 ATP5SQ99766 215 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 LINC00574Q9H8X3 128 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 ASH1LQ9NR48 2969 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 HECTD1Q9ULT8 2610 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 GPR12P47775 334 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 RAB7AP51149 207 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 ERVFC1-1P60608 527 aa11.39□□□□□ -0.59
CSNK1E-201ENST00000359867 TMEM178BH3BS89 294 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 P0C879 139 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 TAS2R30P59541 319 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 SMDT1Q9H4I9 107 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 PPIAL4EA0A075B759 164 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 LOC102723971A0A1B0GUV8 181 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 TMEM238LA0A1B0GVL6 79 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 C17orf98A8MV24 154 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 PPIAL4DF5H284 164 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 SYNGR2O43760 224 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 RAMP3O60896 148 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 PPIAL4FP0DN26 164 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 KRTAP10-9P60411 292 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 LTC4SQ16873 150 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 ZNF787Q6DD87 383 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 PPIAL4AQ9Y536 164 aa11.38□□□□□ -0.59
CSNK1E-201ENST00000359867 A0A087WWC5 75 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 TFPI2P48307 235 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 BRWD1-AS2P59051 145 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 RNASEH2CQ8TDP1 164 aaKnown RBP11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 DNAJC4Q9NNZ3 241 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 TMEM106BQ9NUM4 274 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 IGHV1-69-2A0A0G2JMI3 117 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 RAB29O14966 203 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 ZNF816Q0VGE8 651 aaPredicted RBP11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 OR5I1Q13606 314 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 FAM90A2PQ658T7 463 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 DUX4L9Q6RFH8 374 aaPredicted RBP11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 FAM216BQ8N7L0 139 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
CSNK1E-201ENST00000359867 VPS13CQ709C8 3753 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 hADV38S2A0JD32 116 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 LINC00473A8K010 186 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 IFNA5P01569 189 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 COL8A2P25067 703 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 BRS3P32247 399 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 MEF2CQ06413 473 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 ZNF726P1Q15940 193 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 SLC35E3Q7Z769 313 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 FAM210BQ96KR6 192 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 CCL19Q99731 98 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 IDI2-AS1Q9NZ38 188 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 APCP25054 2843 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 TANC2Q9HCD6 1990 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 S1PR2O95136 353 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 CDKN1BP46527 198 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 ELLP55199 621 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 ZNF705AQ6ZN79 300 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 RBMXL1Q96E39 390 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 IFI27L2Q9H2X8 130 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 LINC00312Q9Y6C7 94 aa11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 MAP1AP78559 2803 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-201ENST00000359867 TNFRSF13BO14836 293 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 HMGB3O15347 200 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 TMPRSS2O15393 492 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 PROP1O75360 226 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 KRASP01116 189 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 G6PCP35575 357 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 KIR2DS2P43631 304 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 ZNF134P52741 427 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 BATFQ16520 125 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 TCF23Q7RTU1 214 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 TMEM183AQ8IXX5 376 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 CHTOPQ9Y3Y2 248 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 CSMD1Q96PZ7 3565 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 DFFBO76075 338 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 HBE1P02100 147 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 CLEC12BQ2HXU8 276 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 NECAP1Q8NC96 275 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 PSENENQ9NZ42 101 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 SLC25A10Q9UBX3 287 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 HSPB7Q9UBY9 170 aa11.35□□□□□ -0.59
CSNK1E-201ENST00000359867 DOCK11Q5JSL3 2073 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 FAM90A9PA6NNJ1 464 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 CEBPZOSA8MTT3 80 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 HPRT1P00492 218 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 RNF151Q2KHN1 245 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 H2BFWTQ7Z2G1 175 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 OR13D1Q8NGV5 346 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 IGFBPL1Q8WX77 278 aa11.34□□□□□ -0.59
CSNK1E-201ENST00000359867 PITPNC1Q9UKF7 332 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms