RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 C1QL2Q7Z5L3 287 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 SAXO1Q8IYX7 474 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 DOCK5Q9H7D0 1870 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 FBXL7Q9UJT9 491 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 RNF115Q9Y4L5 304 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 A6NNC1 897 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 H7C1H1 209 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 OR10J3Q5JRS4 329 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 FER1L6-AS1Q8NA97 138 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 OR5P3Q8WZ94 311 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.58□□□□□ -0.24
COL18A1-203ENST00000359759 IFI27L2Q9H2X8 130 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 Q9H3A6 140 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 LINC00587B1AMM8 73 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 SERF1AO75920 110 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 PAPPA2Q9BXP8 1791 aa13.58□□□□□ -0.24
COL18A1-203ENST00000359759 LOC105371267A0A1B0GV96 52 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 HIGD1CA8MV81 97 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 VENTXO95231 258 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 SRP19P09132 144 aaKnown RBP13.57□□□□□ -0.24
COL18A1-203ENST00000359759 SRSF4Q08170 494 aaKnown RBP13.57□□□□□ -0.24
COL18A1-203ENST00000359759 C17orf98A8MV24 154 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 WFDC12Q8WWY7 111 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 PILRAQ9UKJ1 303 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 A0A0U1RRA0 63 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 GFRA3O60609 400 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 GPX4P36969 197 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-203ENST00000359759 ATRAIDQ6UW56 229 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 NDUFA2O43678 99 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 DEFB104AQ8WTQ1 72 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 PSMG3Q9BT73 122 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-203ENST00000359759 ELOVL5Q9NYP7 299 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 SELENOKQ9Y6D0 94 aa13.57□□□□□ -0.24
COL18A1-203ENST00000359759 PDLIM4P50479 330 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 VKORC1Q9BQB6 163 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 SFXN3Q9BWM7 321 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 OR52E5Q8NH55 327 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 UNQ9370/PRO34162Q6UXP9 181 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 IGKV1D-42A0A075B6H8 117 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 CA7P43166 264 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 SDF2L1Q9HCN8 221 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 PRR32B1ATL7 298 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 SRSF3P84103 164 aaKnown RBP13.56□□□□□ -0.24
COL18A1-203ENST00000359759 PRR31Q5SQ13 230 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 TEX29Q8N6K0 151 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 LRTM2Q8N967 370 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 GATAD1Q8WUU5 269 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 TMEM54Q969K7 222 aa13.56□□□□□ -0.24
COL18A1-203ENST00000359759 TRGV2A0A075B6R0 118 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 ARID1AO14497 2285 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 CD200R1LQ6Q8B3 271 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 NRN1Q9NPD7 142 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 LAMTOR2Q9Y2Q5 125 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 TMEM14DPA8MWL7 114 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 FBLN7Q53RD9 439 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-203ENST00000359759 LHFPL4Q7Z7J7 247 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 WISP3O95389 354 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-203ENST00000359759 IGHV3-11P01762 117 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
COL18A1-203ENST00000359759 UCP3P55916 312 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 ORMDL3Q8N138 153 aa13.55□□□□□ -0.24
COL18A1-203ENST00000359759 SLC25A20O43772 301 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 CD8AP01732 235 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 C19orf48Q6RUI8 117 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 FBLIM1Q8WUP2 373 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 C5orf30Q96GV9 206 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 ZNF257Q9Y2Q1 563 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 ABCA3Q99758 1704 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 HOXA3O43365 443 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-203ENST00000359759 COX6A1P12074 109 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 NUTF2P61970 127 aaKnown RBP13.54□□□□□ -0.24
COL18A1-203ENST00000359759 OR2K2Q8NGT1 345 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 KIAA1217Q5T5P2 1943 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 ACP7Q6ZNF0 438 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 FAM89BQ8N5H3 189 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 PHLDA1Q8WV24 401 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-203ENST00000359759 COQ2Q96H96 371 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
COL18A1-203ENST00000359759 PPP1R27Q86WC6 154 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 IFNL4K9M1U5 179 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 ZNF585BQ52M93 769 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 TMEM42Q69YG0 159 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 FGF11Q92914 225 aa13.54□□□□□ -0.24
COL18A1-203ENST00000359759 CD7P09564 240 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 TMEM155Q4W5P6 130 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 SPSB2Q99619 263 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 CARHSP1Q9Y2V2 147 aaKnown RBP13.53□□□□□ -0.24
COL18A1-203ENST00000359759 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 EGR4Q05215 589 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 RTBDNQ9BSG5 229 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-203ENST00000359759 SMRP1Q8NCR6 262 aa13.53□□□□□ -0.24
COL18A1-203ENST00000359759 GDF15Q99988 308 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms