RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ST20Q9HBF5 79 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 CBLN4Q9NTU7 201 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 CHCHD2Q9Y6H1 151 aaPredicted RBP5.46□□□□□ -1.54
UPF2-201ENST00000356352 TRAV8-6A0A0B4J262 113 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 H3BTX0 84 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 PIN1P1O15428 100 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 DTX1Q86Y01 620 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 FAM169BQ8N8A8 192 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 FOXC2Q99958 501 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 A0A087WWC5 75 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 A0A1B0GV72 72 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 FAM90A9PA6NNJ1 464 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 UCP1P25874 307 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 NHLRC3Q5JS37 347 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 CLEC19AQ6UXS0 136 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 ZNRF1Q8ND25 227 aa5.46□□□□□ -1.54
UPF2-201ENST00000356352 LY75O60449 1722 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 PLXNB2O15031 1838 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 C17orf100A8MU93 164 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 EIF3GO75821 320 aaKnown RBP eCLIP5.45□□□□□ -1.54
UPF2-201ENST00000356352 FOXL2P58012 376 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 OR13A1Q8NGR1 328 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 Q9H3A6 140 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 CD5P06127 495 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 IGFBP2P18065 325 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 LDLRAD2Q5SZI1 272 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 COLCA1Q6ZS62 124 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 GTSCR1Q86UQ5 136 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 RCC1LQ96I51 464 aaKnown RBP5.45□□□□□ -1.54
UPF2-201ENST00000356352 VGLL1Q99990 258 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 AKIRIN1Q9H9L7 192 aaPredicted RBP5.45□□□□□ -1.54
UPF2-201ENST00000356352 TRAV21A0A0B4J279 112 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 GREM1O60565 184 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 IGHV3-23P01764 117 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 LINC01559Q495D7 138 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 ATP1A1-AS1Q5TC04 95 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 TNFRSF14Q92956 283 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 MRPL20Q9BYC9 149 aaKnown RBP5.45□□□□□ -1.54
UPF2-201ENST00000356352 NXT2Q9NPJ8 142 aaKnown RBP5.45□□□□□ -1.54
UPF2-201ENST00000356352 FABP5P3A8MUU1 101 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 YPEL1O60688 119 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 CGAP01215 116 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 CRYBA2P53672 197 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 H2BFSP57053 126 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 KIAA1644Q3SXP7 199 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 OR2K2Q8NGT1 345 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 YPEL2Q96QA6 119 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 SLC25A2Q9BXI2 301 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 WNT10AQ9GZT5 417 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 GRIFINA4D1Z8 144 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 KLF4O43474 513 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 PPBPP02775 128 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 FAM166AQ6J272 317 aa5.45□□□□□ -1.54
UPF2-201ENST00000356352 CARHSP1Q9Y2V2 147 aaKnown RBP5.45□□□□□ -1.54
UPF2-201ENST00000356352 CBLN1P23435 193 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 EGR4Q05215 589 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 SRSF1Q07955 248 aaKnown RBP eCLIP5.44□□□□□ -1.54
UPF2-201ENST00000356352 ORMDL2Q53FV1 153 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 TOMM7Q9P0U1 55 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 SCN9AQ15858 1988 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 NUP205Q92621 2012 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 SIPA1L3O60292 1781 aaPredicted RBP5.44□□□□□ -1.54
UPF2-201ENST00000356352 PQLC2LA1A4F0 135 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 C4orf51C9J302 202 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 UPK2O00526 184 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 OVOL1O14753 267 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 TMEM50AO95807 157 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 LINC00271P0C7V0 271 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 FAM27E3Q08E93 113 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 ZNF600Q6ZNG1 722 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 RNF182Q8N6D2 247 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 OR5AN1Q8NGI8 311 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 OR5A1Q8NGJ0 315 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 METRNQ9UJH8 293 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 LTBP4Q8N2S1 1624 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 IGHV3-66A0A0C4DH42 116 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 A0A1B0GWB2 263 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 TGFAP01135 160 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 IGLV3-19P01714 112 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 TMEM144Q7Z5S9 345 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 SIGLEC12Q96PQ1 595 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 COL24A1Q17RW2 1714 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 LINC00587B1AMM8 73 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 FAM216BQ8N7L0 139 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 C18orf15Q96N68 181 aa5.44□□□□□ -1.54
UPF2-201ENST00000356352 REPIN1Q9BWE0 567 aaKnown RBP5.44□□□□□ -1.54
UPF2-201ENST00000356352 TBL2Q9Y4P3 447 aaKnown RBP5.44□□□□□ -1.54
UPF2-201ENST00000356352 C15orf61A6NNL5 157 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 C17orf98A8MV24 154 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 IGHV1-2P23083 117 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 EFNB1P98172 346 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 TFF3Q07654 80 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 MBD3L1Q8WWY6 194 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 TRAV14DV4A0A0A6YYC5 116 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 SCO2A0A1W2PP80 73 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 ZIC3O60481 467 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 THBDP07204 575 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 TMEM86BQ8N661 226 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 SSC4DQ8WTU2 575 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 GTF3AQ92664 365 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms