RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 TMEM105Q8N8V8 129 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 ZNRF1Q8ND25 227 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 RND1Q92730 232 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
TRIM4-203ENST00000355947 TTTY12Q9BZ98 90 aa11.31□□□□□ -0.6
TRIM4-203ENST00000355947 M0R2Z0 102 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 GFRA1P56159 465 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 RIF1Q5UIP0 2472 aaKnown RBP11.3□□□□□ -0.6
TRIM4-203ENST00000355947 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 OR2Z1Q8NG97 314 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 OR2D3Q8NGH3 330 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 NANOS1Q8WY41 292 aaKnown RBP11.3□□□□□ -0.6
TRIM4-203ENST00000355947 ZC2HC1AQ96GY0 325 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 CLEC5AQ9NY25 188 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 KMT2EQ8IZD2 1858 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 OOEPA6NGQ2 149 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 CSN3P07498 182 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 EFNB3Q15768 340 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 A0A1W2PN81 502 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 AHRRA9YTQ3 701 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 RAB29O14966 203 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 MRPS11P82912 194 aaKnown RBP11.3□□□□□ -0.6
TRIM4-203ENST00000355947 RPL19P84098 196 aaKnown RBP11.3□□□□□ -0.6
TRIM4-203ENST00000355947 ACSF3Q4G176 576 aaPredicted RBP11.3□□□□□ -0.6
TRIM4-203ENST00000355947 STUMQ69YW2 141 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 COQ2Q96H96 371 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 TCF19Q9Y242 345 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 SIT1Q9Y3P8 196 aa11.3□□□□□ -0.6
TRIM4-203ENST00000355947 AKAP6Q13023 2319 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 GPX1P07203 203 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 ZNRD1Q9P1U0 126 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 UQCR10Q9UDW1 63 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 HYPMO75409 117 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 NPY1RP25929 384 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 CLDN18P56856 261 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
TRIM4-203ENST00000355947 RNPS1Q15287 305 aaKnown RBP11.29□□□□□ -0.6
TRIM4-203ENST00000355947 UTF1Q5T230 341 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 IBA57Q5T440 356 aaKnown RBP11.29□□□□□ -0.6
TRIM4-203ENST00000355947 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 RNF2Q99496 336 aa11.29□□□□□ -0.6
TRIM4-203ENST00000355947 TRAV5A0A0B4J249 113 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 CD46P15529 392 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 ZNF83P51522 516 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 IGHV3-21A0A0B4J1V1 117 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 CA2P00918 260 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 APCSP02743 223 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 Q8NFD4 153 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 FAM173AQ9BQD7 235 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 C20orf144Q9BQM9 153 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 PKIBQ9C010 78 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 SH2D2AQ9NP31 389 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 PIEZO2Q9H5I5 2752 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.28□□□□□ -0.6
TRIM4-203ENST00000355947 A0A1W2PS18 150 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 CCL25O15444 150 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 CEACAM8P31997 349 aaPredicted RBP11.28□□□□□ -0.6
TRIM4-203ENST00000355947 ZNF596Q8TC21 504 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 WASHC3Q9Y3C0 194 aa11.28□□□□□ -0.6
TRIM4-203ENST00000355947 MRPS18CQ9Y3D5 142 aaKnown RBP11.28□□□□□ -0.6
TRIM4-203ENST00000355947 MEOX1P50221 254 aa11.27□□□□□ -0.6
TRIM4-203ENST00000355947 C6orf15Q6UXA7 325 aaPredicted RBP11.27□□□□□ -0.6
TRIM4-203ENST00000355947 LINC00596Q86U02 117 aa11.27□□□□□ -0.6
TRIM4-203ENST00000355947 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.6
TRIM4-203ENST00000355947 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.6
TRIM4-203ENST00000355947 FAM168AQ92567 244 aa11.27□□□□□ -0.6
TRIM4-203ENST00000355947 TPPP3Q9BW30 176 aa11.27□□□□□ -0.6
TRIM4-203ENST00000355947 UBE2ZQ9H832 354 aaPredicted RBP11.27□□□□□ -0.6
TRIM4-203ENST00000355947 NPVFQ9HCQ7 196 aa11.27□□□□□ -0.6
TRIM4-203ENST00000355947 ZFP30Q9Y2G7 519 aa11.27□□□□□ -0.6
TRIM4-203ENST00000355947 C10orf142B7Z368 130 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 LGALS4P56470 323 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 RELQ04864 619 aaPredicted RBP11.27□□□□□ -0.61
TRIM4-203ENST00000355947 KRTAP27-1Q3LI81 207 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 REG1BP48304 166 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
TRIM4-203ENST00000355947 LEMD1Q68G75 181 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 Q8IYB0 196 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 TCTEX1D1Q8N7M0 179 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 GMPPAQ96IJ6 420 aaPredicted RBP11.27□□□□□ -0.61
TRIM4-203ENST00000355947 OR8B2Q96RD0 313 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
TRIM4-203ENST00000355947 COL5A1P20908 1838 aaPredicted RBP11.26□□□□□ -0.61
TRIM4-203ENST00000355947 SMPD2O60906 423 aa11.26□□□□□ -0.61
TRIM4-203ENST00000355947 DUSP3P51452 185 aaPredicted RBP11.26□□□□□ -0.61
TRIM4-203ENST00000355947 SRSF7Q16629 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRIM4-203ENST00000355947 OR5B3Q8NH48 314 aa11.26□□□□□ -0.61
TRIM4-203ENST00000355947 TRIB1Q96RU8 372 aa11.26□□□□□ -0.61
TRIM4-203ENST00000355947 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
TRIM4-203ENST00000355947 ABCA4P78363 2273 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms