RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 RPA2P15927 270 aa10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 GNRHRP30968 328 aa10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 RBPMS2Q6ZRY4 209 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 OR1L6Q8NGR2 347 aa10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 COMMD9Q9P000 198 aa10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 UFC1Q9Y3C8 167 aa10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 HERV-K104P61576 105 aa10.77□□□□□ -0.68
PRPF40A-201ENST00000354363 THOC7Q6I9Y2 204 aaKnown RBP10.77□□□□□ -0.68
PRPF40A-201ENST00000354363 GDPD1Q8N9F7 314 aa10.77□□□□□ -0.68
PRPF40A-201ENST00000354363 TEX50A0A1B0GTY4 177 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 SERPINE2P07093 398 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 TRAPPC2P0DI81 140 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 TRAPPC2BP0DI82 140 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 OR13C7P0DN81 318 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 WT1-ASQ06250 92 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 OR2C3Q8N628 320 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 C5orf66Q9H5L9 145 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 IFT46Q9NQC8 304 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 EHFQ9NZC4 300 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 OR2T8A6NH00 312 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 CYB5BO43169 146 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 XRCC3O43542 346 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 TMEM127O75204 238 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 MFAP2P55001 183 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 ERVK-16P61578 105 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 NEDD8Q15843 81 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 SLC25A24Q6NUK1 477 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 DHRS11Q6UWP2 260 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 HSD17B13Q7Z5P4 300 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 SLC38A6Q8IZM9 456 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 OR1L8Q8NGR8 309 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 BORCS5Q969J3 196 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 SPAG8Q99932 426 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 ANAPC10Q9UM13 185 aa10.76□□□□□ -0.69
PRPF40A-201ENST00000354363 MARCH11A6NNE9 402 aa10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 TSPAN4O14817 238 aa10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 PGLYRP1O75594 196 aaPredicted RBP10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 RLN1P04808 185 aa10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 F2RP25116 425 aa10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 RFX2P48378 723 aa10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 MOB3AQ96BX8 217 aa10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 BSCL2Q96G97 398 aaPredicted RBP10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 ZNF2Q9BSG1 426 aaPredicted RBP10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 UBQLN2Q9UHD9 624 aa10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 F11RQ9Y624 299 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-201ENST00000354363 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 TGFBR1P36897 503 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 LPAR6P43657 344 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 SPSB3Q6PJ21 355 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 FCAMRQ8WWV6 532 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 S100A16Q96FQ6 103 aaKnown RBP10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 CHRDL1Q9BU40 450 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 HINT2Q9BX68 163 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 DAZ1Q9NQZ3 744 aaKnown RBP10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 NSG2Q9Y328 171 aa10.74□□□□□ -0.69
PRPF40A-201ENST00000354363 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 NDUFA4O00483 81 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 PMP2P02689 132 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 NAT1P18440 290 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 APOC4P55056 127 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 UBE2NLQ5JXB2 153 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 CADM3Q8N126 398 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 SCARB1Q8WTV0 552 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 LSM10Q969L4 123 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 ATP6V0BQ99437 205 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 FXYD6Q9H0Q3 95 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 C21orf62Q9NYP8 219 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 TP53TG1Q9Y2A0 90 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 OR51B2Q9Y5P1 312 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 A0A0J9YWU9 116 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 K7EIM0 57 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 SPRY2O43597 315 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 KRASP01116 189 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 ADMP35318 185 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 G6PCP35575 357 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 TAS2R20P59543 309 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 EWSR1Q01844 656 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 ODF3L2Q3SX64 289 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 LAMTOR1Q6IAA8 161 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 Q6ZWC4 215 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 CROCCP3Q8IVE0 287 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 OR5H2Q8NGV7 314 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 LINC00476Q8WZB0 136 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 C20orf24Q9BUV8 137 aa10.73□□□□□ -0.69
PRPF40A-201ENST00000354363 IGHV3OR16-8A0A075B7F1 116 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 CXorf65A6NEN9 183 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 K7EMT4 169 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 SNAPC5O75971 98 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 TAS2R46P59540 309 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 TNFRSF9Q07011 255 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 PMS2P11Q13670 270 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 DEFB135Q30KP9 77 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 TMEM69Q5SWH9 247 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 LYG2Q86SG7 212 aa10.72□□□□□ -0.69
PRPF40A-201ENST00000354363 KMT2AQ03164 3969 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms