RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 VAMP8Q9BV40 100 aa12.43□□□□□ -0.42
COL17A1-201ENST00000353479 KLHDC1Q8N7A1 406 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 TMEM116Q8NCL8 245 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 TXNDC17Q9BRA2 123 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 RRHO14718 337 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 PRSS1P07477 247 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 PTTG1IPP53801 180 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 IBA57Q5T440 356 aaKnown RBP12.42□□□□□ -0.42
COL17A1-201ENST00000353479 DTX1Q86Y01 620 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 SPSB4Q96A44 273 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 RPRMLQ8N4K4 120 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 SCN8AQ9UQD0 1980 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 RAMP3O60896 148 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 APCSP02743 223 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 CRYBB3P26998 211 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 GPR183P32249 361 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 MFAP2P55001 183 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 NUP37Q8NFH4 326 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 F8VVB4 439 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 F8VWA3 439 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 IGFBP2P18065 325 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 C12orf57Q99622 126 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
COL17A1-201ENST00000353479 DOCK9Q9BZ29 2069 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 TRAV40A0A0B4J280 105 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 TMEM178BH3BS89 294 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 ZNF418Q8TF45 676 aaPredicted RBP12.41□□□□□ -0.42
COL17A1-201ENST00000353479 SLC25A33Q9BSK2 321 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 NPCDR1Q9BY65 106 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 MRPL32Q9BYC8 188 aaKnown RBP12.41□□□□□ -0.42
COL17A1-201ENST00000353479 PROK2Q9HC23 129 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 C21orf62Q9NYP8 219 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 DANCRP0C864 163 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 NEUROG1Q92886 237 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 A8MWL6 223 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 RAB9AP51151 201 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 DLX6P56179 175 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 TFF3Q07654 80 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 GATAD1Q8WUU5 269 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 WNT10AQ9GZT5 417 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 TMEM8BA6NDV4 472 aa12.41□□□□□ -0.42
COL17A1-201ENST00000353479 PSPNO60542 156 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 IGHV3-11P01762 117 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 ZNF324BQ6AW86 544 aaPredicted RBP12.4□□□□□ -0.42
COL17A1-201ENST00000353479 CLEC19AQ6UXS0 136 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 DDB2Q92466 427 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 TRAF4Q9BUZ4 470 aaPredicted RBP12.4□□□□□ -0.42
COL17A1-201ENST00000353479 CRIM1Q9NZV1 1036 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 A0A0G2JLM5 398 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 DPRXA6NFQ7 191 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 AMY1AP04745 511 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 HELZP42694 1942 aaKnown RBP12.4□□□□□ -0.42
COL17A1-201ENST00000353479 EGR1P18146 543 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 PLAURQ03405 335 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 TCF15Q12870 199 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 CD177Q8N6Q3 437 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.42
COL17A1-201ENST00000353479 EP400Q96L91 3159 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 UPK2O00526 184 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 SIAH2O43255 324 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 BTCP35070 178 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 C20orf204Q6ZNR8 217 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 RAX2Q96IS3 184 aa12.4□□□□□ -0.42
COL17A1-201ENST00000353479 A0A1W2PRX2 142 aa12.4□□□□□ -0.43
COL17A1-201ENST00000353479 TIMM23O14925 209 aa12.4□□□□□ -0.43
COL17A1-201ENST00000353479 WISP1O95388 367 aa12.4□□□□□ -0.43
COL17A1-201ENST00000353479 IGKV3-20P01619 116 aa12.4□□□□□ -0.43
COL17A1-201ENST00000353479 IGKV3-15P01624 115 aa12.4□□□□□ -0.43
COL17A1-201ENST00000353479 FHL1Q13642 323 aa12.4□□□□□ -0.43
COL17A1-201ENST00000353479 IQCJQ1A5X6 159 aa12.4□□□□□ -0.43
COL17A1-201ENST00000353479 TEX50A0A1B0GTY4 177 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 IGFL3Q6UXB1 125 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 RNF144BQ7Z419 303 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 OR4X2Q8NGF9 303 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
COL17A1-201ENST00000353479 METRNQ9UJH8 293 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 MDKP21741 143 aaPredicted RBP12.39□□□□□ -0.43
COL17A1-201ENST00000353479 GCHFRP30047 84 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 RRN3P1Q2M238 152 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 FOSL1P15407 271 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 CD81P60033 236 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 NCMAPQ5T1S8 102 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 RNF224P0DH78 156 aa12.39□□□□□ -0.43
COL17A1-201ENST00000353479 ZFHX2Q9C0A1 2572 aaPredicted RBP12.39□□□□□ -0.43
COL17A1-201ENST00000353479 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
COL17A1-201ENST00000353479 TMEM200BQ69YZ2 307 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 C18orf12Q96KH6 178 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 LY6HO94772 140 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 GPX1P07203 203 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 RPRMQ9NS64 109 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 AKAP6Q13023 2319 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 FOXL2NBQ6ZUU3 175 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 DUTP33316 252 aaKnown RBP12.38□□□□□ -0.43
COL17A1-201ENST00000353479 DSCR9P59020 149 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 HGFACQ04756 655 aa12.38□□□□□ -0.43
COL17A1-201ENST00000353479 TMEM177Q53S58 311 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms