RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 IGHV3OR15-7A0A075B7D8 119 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 IGHV3-43A0A0B4J1X8 118 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 MARCH11A6NNE9 402 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 DEFB108AA8MXU0 73 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 C17orf112F2Z3M2 114 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 IGHV3-43DP0DP04 118 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 CCL8P80075 99 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 CST9LP1Q5W188 147 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 DUX4L9Q6RFH8 374 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-204ENST00000353317 ACP7Q6ZNF0 438 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 TMEM144Q7Z5S9 345 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 TGIF2LXQ8IUE1 241 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 GBGT1Q8N5D6 347 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 CD177Q8N6Q3 437 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 ITLN2Q8WWU7 325 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-204ENST00000353317 NINJ1Q92982 152 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 DIRC2Q96SL1 478 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 MAP1AP78559 2803 aaPredicted RBP7.07□□□□□ -1.28
TRIM55-204ENST00000353317 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 A0A0U1RQK1 487 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 ZNF320A2RRD8 509 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 EREGO14944 169 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 TMPRSS2O15393 492 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 RBFOX2O43251 390 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRIM55-204ENST00000353317 PDE6DO43924 150 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 NUPR1O60356 82 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 CD1BP29016 333 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 GABRA2P47869 451 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 SLC35E4Q6ICL7 350 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 TEX38Q6PEX7 206 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 C1orf174Q8IYL3 243 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 TMEM256Q8N2U0 113 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 RFESDQ8TAC1 157 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 LRRC29Q8WV35 223 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 QTRT1Q9BXR0 403 aaKnown RBP7.07□□□□□ -1.28
TRIM55-204ENST00000353317 PATZ1Q9HBE1 687 aaKnown RBP7.07□□□□□ -1.28
TRIM55-204ENST00000353317 GCM1Q9NP62 436 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 WDR83OSQ9Y284 106 aa7.07□□□□□ -1.28
TRIM55-204ENST00000353317 IGKV1D-17A0A075B6S4 117 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 LHBP01229 141 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 CD99P14209 185 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 EDDM3BP56851 147 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 IQCJQ1A5X6 159 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 LURAP1Q96LR2 239 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 TRAPPC1Q9Y5R8 145 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 PXMP4Q9Y6I8 212 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 YLPM1P49750 1951 aaKnown RBP7.06□□□□□ -1.28
TRIM55-204ENST00000353317 MED13LQ71F56 2210 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 LRRK2Q5S007 2527 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 KMT2BQ9UMN6 2715 aaPredicted RBP7.06□□□□□ -1.28
TRIM55-204ENST00000353317 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.06□□□□□ -1.28
TRIM55-204ENST00000353317 OR9G9P0C7N8 305 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 FOXL1Q12952 345 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 OR13A1Q8NGR1 328 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 SGMS2Q8NHU3 365 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 RAB1CQ92928 201 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 TMEM204Q9BSN7 226 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 UBR5O95071 2799 aaPredicted RBP7.06□□□□□ -1.28
TRIM55-204ENST00000353317 CENPEQ02224 2701 aa7.06□□□□□ -1.28
TRIM55-204ENST00000353317 SPG11Q96JI7 2443 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 A0A1W2PPV4 95 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 SRRM5B3KS81 715 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 PROP1O75360 226 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 FIP1L1Q6UN15 594 aaKnown RBP7.05□□□□□ -1.28
TRIM55-204ENST00000353317 SFRP2Q96HF1 295 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 KCNIP2Q9NS61 270 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 PSG11Q9UQ72 335 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 ARHGAP32A7KAX9 2087 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 FAM208BQ5VWN6 2430 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 C17orf100A8MU93 164 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 FCN3O75636 299 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 SCGB1D1O95968 90 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 ARL14EPLP0DKL9 152 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 SPCS3P61009 180 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 NUTF2P61970 127 aaKnown RBP7.05□□□□□ -1.28
TRIM55-204ENST00000353317 TNFAIP6P98066 277 aaPredicted RBP7.05□□□□□ -1.28
TRIM55-204ENST00000353317 TMEM249Q2WGJ8 235 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 TREML4Q6UXN2 200 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 TCTEX1D1Q8N7M0 179 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 R3HDM4Q96D70 268 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 NEU1Q99519 415 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 ATG101Q9BSB4 218 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 DCTN5Q9BTE1 182 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 SNHG12Q9BXW3 62 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 FKBP11Q9NYL4 201 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 CELSR2Q9HCU4 2923 aa7.05□□□□□ -1.28
TRIM55-204ENST00000353317 RRHO14718 337 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 FOSL1P15407 271 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 COL8A2P25067 703 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 CFHR2P36980 270 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 GATA4P43694 442 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 RAB4BP61018 213 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 ZNF124Q15973 351 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 LTC4SQ16873 150 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 ZNRF1Q8ND25 227 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 SDSLQ96GA7 329 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 HSD17B10Q99714 261 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms