RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MEX3AA1L020 520 aaKnown RBP6.63□□□□□ -1.35
CD44-205ENST00000352818 DNAJC9-AS1A6NH13 148 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 C15orf61A6NNL5 157 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 CEBPZOSA8MTT3 80 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 B4DSR2 109 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 RNASEK-C17orf49H0YIS7 233 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 DVL1O14640 695 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 SOX15O60248 233 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 MMP23AO75900 390 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 HRASP01112 189 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 FSHBP01225 129 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 IGHV2-70P01814 119 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 HBE1P02100 147 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 APOC3P02656 99 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 PRH1P02810 166 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 IL6RP08887 468 aaPredicted RBP6.63□□□□□ -1.35
CD44-205ENST00000352818 NFYBP25208 207 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 ZNF137PP52743 207 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 GNB2P62879 340 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 ZNF616Q08AN1 781 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 PEA15Q15121 130 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 AKR1C8PQ5T2L2 129 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 TMEM200BQ69YZ2 307 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 SLC25A24Q6NUK1 477 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 REC114Q7Z4M0 266 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 LYG1Q8N1E2 194 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 SIGLECL1Q8N7X8 197 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 ZNF383Q8NA42 475 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 OR4A16Q8NH70 328 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 FAM110DQ8TAY7 271 aaPredicted RBP6.63□□□□□ -1.35
CD44-205ENST00000352818 FAM213BQ8TBF2 198 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 SCGB1C1Q8TD33 95 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 TMEM147Q9BVK8 224 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 GGACTQ9BVM4 153 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 SCRT1Q9BWW7 348 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 QTRT1Q9BXR0 403 aaKnown RBP6.63□□□□□ -1.35
CD44-205ENST00000352818 WDR61Q9GZS3 305 aaKnown RBP6.63□□□□□ -1.35
CD44-205ENST00000352818 TMEM14BQ9NUH8 114 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 TMEM140Q9NV12 185 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 KIAA1456Q9P272 454 aa6.63□□□□□ -1.35
CD44-205ENST00000352818 FOXA2Q9Y261 457 aaPredicted RBP6.63□□□□□ -1.35
CD44-205ENST00000352818 F8W036 122 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 SCO1O75880 301 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 CT45A6P0DMU7 189 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 CT45A5P0DMU8 189 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 CT45A7P0DMV0 189 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 VDAC2P45880 294 aaPredicted RBP6.62□□□□□ -1.35
CD44-205ENST00000352818 LINC00205P59089 165 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 SRSF3P84103 164 aaKnown RBP6.62□□□□□ -1.35
CD44-205ENST00000352818 RUNX1Q01196 453 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 PMS2P11Q13670 270 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 GUK1Q16774 197 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 UTF1Q5T230 341 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 SPSB3Q6PJ21 355 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 LYPD2Q6UXB3 125 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 KIR3DL3Q8N743 410 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 OR10P1Q8NGE3 313 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 C8orf46Q8TAG6 207 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 OSR1Q8TAX0 266 aaPredicted RBP6.62□□□□□ -1.35
CD44-205ENST00000352818 TNFRSF14Q92956 283 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 ZDHHC16Q969W1 377 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 CLCC1Q96S66 551 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 PCGF1Q9BSM1 259 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
CD44-205ENST00000352818 AURKAIP1Q9NWT8 199 aaPredicted RBP6.62□□□□□ -1.35
CD44-205ENST00000352818 PRNDQ9UKY0 176 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 ZNF257Q9Y2Q1 563 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 KPTNQ9Y664 436 aa6.62□□□□□ -1.35
CD44-205ENST00000352818 C15orf62A8K5M9 175 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 PRSS46E5RG02 174 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 NDUFS6O75380 124 aaKnown RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 RBMXL2O75526 392 aaKnown RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 SNAPINO95295 136 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 MBP02144 154 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 APOA2P02652 100 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 RNASE1P07998 156 aaKnown RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 MSMBP08118 114 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 H2AFB1P0C5Y9 115 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 SFTA3P0C7M3 94 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 CCL3L1P16619 93 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 FHITP49789 147 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 GNG10P50151 68 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 ATP5IP56385 69 aaPredicted RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 RAB2AP61019 212 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 DEFA5Q01523 94 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 TMEM177Q53S58 311 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 TMEM41BQ5BJD5 291 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 THNSL2Q86YJ6 484 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 OR5AN1Q8NGI8 311 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 OR13D1Q8NGV5 346 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 NEU4Q8WWR8 484 aaPredicted RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 MBD3L1Q8WWY6 194 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 H1FXQ92522 213 aaKnown RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 RHOVQ96L33 236 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 ZNF48Q96MX3 618 aaPredicted RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 MS4A7Q9GZW8 240 aaPredicted RBP6.61□□□□□ -1.35
CD44-205ENST00000352818 RAB1BQ9H0U4 201 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 SLC35D1Q9NTN3 355 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms