RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SLC25A10Q9UBX3 287 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-202ENST00000352393 LINC00869P0C866 280 aa20.13■□□□□ 0.81
CPNE1-202ENST00000352393 SELLP14151 372 aa20.13■□□□□ 0.81
CPNE1-202ENST00000352393 POU2AF1Q16633 256 aa20.13■□□□□ 0.81
CPNE1-202ENST00000352393 TGIF2LXQ8IUE1 241 aa20.13■□□□□ 0.81
CPNE1-202ENST00000352393 ZCCHC14Q8WYQ9 949 aaKnown RBP20.13■□□□□ 0.81
CPNE1-202ENST00000352393 ENY2Q9NPA8 101 aa20.13■□□□□ 0.81
CPNE1-202ENST00000352393 DSCAMO60469 2012 aa20.13■□□□□ 0.81
CPNE1-202ENST00000352393 MRPL18Q9H0U6 180 aaKnown RBP20.12■□□□□ 0.81
CPNE1-202ENST00000352393 DKK4Q9UBT3 224 aa20.12■□□□□ 0.81
CPNE1-202ENST00000352393 NUTF2P61970 127 aaKnown RBP20.12■□□□□ 0.81
CPNE1-202ENST00000352393 SRSF6Q13247 344 aaKnown RBP20.12■□□□□ 0.81
CPNE1-202ENST00000352393 MIR17HGQ75NE6 70 aa20.12■□□□□ 0.81
CPNE1-202ENST00000352393 RAB9BQ9NP90 201 aa20.12■□□□□ 0.81
CPNE1-202ENST00000352393 KBTBD11-OT1A0A1B0GTJ5 212 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 MYOD1P15172 320 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 ZNF439Q8NDP4 499 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 ADTRPQ96IZ2 230 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 TRAV17A0A0B4J275 112 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 OR1L6Q8NGR2 347 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 CORO2AQ92828 525 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 SNHG12Q9BXW3 62 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 CBLN4Q9NTU7 201 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 SLC45A2Q9UMX9 530 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 V9GYV3 84 aa20.11■□□□□ 0.81
CPNE1-202ENST00000352393 A8MXE2 369 aa20.1■□□□□ 0.81
CPNE1-202ENST00000352393 PAFAH1B2P68402 229 aa20.1■□□□□ 0.81
CPNE1-202ENST00000352393 MRPS11P82912 194 aaKnown RBP20.1■□□□□ 0.81
CPNE1-202ENST00000352393 RPEL1Q2QD12 228 aa20.1■□□□□ 0.81
CPNE1-202ENST00000352393 Q6ZWC4 215 aa20.1■□□□□ 0.81
CPNE1-202ENST00000352393 TMEM106BQ9NUM4 274 aa20.1■□□□□ 0.81
CPNE1-202ENST00000352393 OR51B2Q9Y5P1 312 aa20.1■□□□□ 0.81
CPNE1-202ENST00000352393 CRISP2P16562 243 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 ZNF83P51522 516 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 TPPP2P59282 170 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 FAM222BQ8WU58 562 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 ITLN1Q8WWA0 313 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 PRRC2CQ9Y520 2896 aaKnown RBP20.09■□□□□ 0.81
CPNE1-202ENST00000352393 AHRRA9YTQ3 701 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 KRTCAP3Q53RY4 240 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 MMD2Q8IY49 270 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 TBX15Q96SF7 602 aa20.09■□□□□ 0.81
CPNE1-202ENST00000352393 RAI1Q7Z5J4 1906 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-202ENST00000352393 SERF1AO75920 110 aa20.08■□□□□ 0.81
CPNE1-202ENST00000352393 KLF3P57682 345 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-202ENST00000352393 FAM201AQ5SY85 155 aa20.08■□□□□ 0.81
CPNE1-202ENST00000352393 LYG1Q8N1E2 194 aa20.08■□□□□ 0.81
CPNE1-202ENST00000352393 NEU1Q99519 415 aa20.08■□□□□ 0.81
CPNE1-202ENST00000352393 TMEM167BQ9NRX6 74 aa20.08■□□□□ 0.81
CPNE1-202ENST00000352393 PRNDQ9UKY0 176 aa20.08■□□□□ 0.81
CPNE1-202ENST00000352393 ACTL6BO94805 426 aa20.08■□□□□ 0.8
CPNE1-202ENST00000352393 OR10J4P0C629 311 aa20.08■□□□□ 0.8
CPNE1-202ENST00000352393 PRCDQ00LT1 54 aa20.08■□□□□ 0.8
CPNE1-202ENST00000352393 CENPWQ5EE01 88 aa20.08■□□□□ 0.8
CPNE1-202ENST00000352393 DUX4L9Q6RFH8 374 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-202ENST00000352393 SEM1Q6ZVN7 128 aa20.08■□□□□ 0.8
CPNE1-202ENST00000352393 NABP2Q9BQ15 211 aa20.08■□□□□ 0.8
CPNE1-202ENST00000352393 ZNF257Q9Y2Q1 563 aa20.08■□□□□ 0.8
CPNE1-202ENST00000352393 PCNX2A6NKB5 2137 aa20.07■□□□□ 0.8
CPNE1-202ENST00000352393 TRBV9A0A0B4J1U6 114 aa20.07■□□□□ 0.8
CPNE1-202ENST00000352393 SPRY3O43610 288 aa20.07■□□□□ 0.8
CPNE1-202ENST00000352393 PSG5Q15238 335 aa20.07■□□□□ 0.8
CPNE1-202ENST00000352393 HINT2Q9BX68 163 aa20.07■□□□□ 0.8
CPNE1-202ENST00000352393 ZNF705FA8MVS1 300 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-202ENST00000352393 ZNF705DP0CH99 300 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-202ENST00000352393 ZNF705BP0CI00 300 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-202ENST00000352393 OR5I1Q13606 314 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 FAM122AQ96E09 287 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 ZNF503Q96F45 646 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 PLEKHA3Q9HB20 300 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 M0R1B8 84 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 FCN1O00602 326 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 TCAPO15273 167 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 FRMD6-AS1P0C7T7 363 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 GATA4P43694 442 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 IER3P46695 156 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 GNG4P50150 75 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 RANP62826 216 aaKnown RBP20.06■□□□□ 0.8
CPNE1-202ENST00000352393 Q0VG73 95 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 TPTE2P1Q5T6R2 138 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 SLC35E1Q96K37 410 aa20.06■□□□□ 0.8
CPNE1-202ENST00000352393 IGKV1OR2-108A0A075B7D4 117 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 MBD3L4A6NDZ8 208 aaPredicted RBP20.05■□□□□ 0.8
CPNE1-202ENST00000352393 MBD3L3A6NE82 208 aaPredicted RBP20.05■□□□□ 0.8
CPNE1-202ENST00000352393 MBD3L5A6NJ08 208 aaPredicted RBP20.05■□□□□ 0.8
CPNE1-202ENST00000352393 J3QR06 171 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 UPK2O00526 184 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 RAB4AP20338 218 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 GLRXP35754 106 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 STUMQ69YW2 141 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 TEX43Q6ZNM6 134 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 MBD3L2Q8NHZ7 208 aaPredicted RBP20.05■□□□□ 0.8
CPNE1-202ENST00000352393 LRFN3Q9BTN0 628 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 IL19Q9UHD0 177 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 IGLV3-9A0A075B6K5 115 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 SNURFLB1AK76 121 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 M0R143 59 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 MOB3BQ86TA1 216 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 GNB1LQ9BYB4 327 aa20.05■□□□□ 0.8
CPNE1-202ENST00000352393 TECRQ9NZ01 308 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms