RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ATP6V0CP27449 155 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 BRS3P32247 399 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 SULT1A2P50226 295 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 ERHP84090 104 aaKnown RBP14.97□□□□□ -0.01
PTN-201ENST00000348225 PLGLAQ15195 96 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 MMDQ15546 238 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 DYNAPQ8N1N2 210 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 EAF1Q96JC9 268 aaPredicted RBP14.97□□□□□ -0.01
PTN-201ENST00000348225 C7orf69Q9H7B7 122 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 UQCC1Q9NVA1 299 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 HIF1ANQ9NWT6 349 aa14.97□□□□□ -0.01
PTN-201ENST00000348225 RRHO14718 337 aa14.96□□□□□ -0.01
PTN-201ENST00000348225 NBR2O15453 112 aa14.96□□□□□ -0.01
PTN-201ENST00000348225 IFNA4P05014 189 aa14.96□□□□□ -0.01
PTN-201ENST00000348225 NPBQ8NG41 125 aa14.96□□□□□ -0.01
PTN-201ENST00000348225 C17orf50Q8WW18 174 aa14.96□□□□□ -0.01
PTN-201ENST00000348225 GGACTQ9BVM4 153 aa14.96□□□□□ -0.01
PTN-201ENST00000348225 SH3BGRL3Q9H299 93 aa14.96□□□□□ -0.01
PTN-201ENST00000348225 CENPEQ02224 2701 aa14.96□□□□□ -0.02
PTN-201ENST00000348225 TRAV40A0A0B4J280 105 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 UBE2L5PA0A1B0GUS4 154 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 CA2P00918 260 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 FAM157CP0CG43 387 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 FAM106CPP0CH98 169 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 PAX6P26367 422 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 SNCAP37840 140 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 RPL27AP46776 148 aaKnown RBP14.95□□□□□ -0.02
PTN-201ENST00000348225 RAB5CP51148 216 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 PJVKQ0ZLH3 352 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 EBI3Q14213 229 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 TNXAQ16473 311 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 MRGPRG-AS1Q2M3A8 158 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 LRRC75BQ2VPJ9 315 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 HIST2H2BCQ6DN03 193 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 SAT2Q96F10 170 aaPredicted RBP14.95□□□□□ -0.02
PTN-201ENST00000348225 WDR61Q9GZS3 305 aaKnown RBP14.95□□□□□ -0.02
PTN-201ENST00000348225 FBXL15Q9H469 300 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 MED9Q9NWA0 146 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 PFDN2Q9UHV9 154 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 ZNF705EA8MWA4 302 aaPredicted RBP14.95□□□□□ -0.02
PTN-201ENST00000348225 RNF223E7ERA6 249 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 NDUFA3O95167 84 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 HNF4GQ14541 408 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 VWC2Q2TAL6 325 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 OR2G3Q8NGZ4 309 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 AJUBAQ96IF1 538 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 CXorf58Q96LI9 332 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 REG4Q9BYZ8 158 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 HELZ2Q9BYK8 2649 aaKnown RBP14.95□□□□□ -0.02
PTN-201ENST00000348225 TNCP24821 2201 aa14.95□□□□□ -0.02
PTN-201ENST00000348225 COMPP49747 757 aaPredicted RBP14.94□□□□□ -0.02
PTN-201ENST00000348225 C2orf83Q53S99 150 aa14.94□□□□□ -0.02
PTN-201ENST00000348225 C10orf55Q5SWW7 151 aa14.94□□□□□ -0.02
PTN-201ENST00000348225 COMMD7Q86VX2 200 aa14.94□□□□□ -0.02
PTN-201ENST00000348225 OR10W1Q8NGF6 305 aa14.94□□□□□ -0.02
PTN-201ENST00000348225 TMEM170AQ8WVE7 144 aa14.94□□□□□ -0.02
PTN-201ENST00000348225 UMAD1C9J7I0 102 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 J3QLI3 93 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 TMEM11P17152 192 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 CD24P25063 80 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 GNB1P62873 340 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 BLOC1S1P78537 153 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 DLK1P80370 383 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 RUNX1Q01196 453 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 BSXQ3C1V8 233 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 TMEM182Q6ZP80 229 aaPredicted RBP14.93□□□□□ -0.02
PTN-201ENST00000348225 Q8N6K4 173 aa14.93□□□□□ -0.02
PTN-201ENST00000348225 PSMG3Q9BT73 122 aaPredicted RBP14.93□□□□□ -0.02
PTN-201ENST00000348225 CGB1A6NKQ9 187 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 TRIM77I1YAP6 450 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 SUB1P53999 127 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTN-201ENST00000348225 RUSC1-AS1Q66K80 236 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 TAF15Q92804 592 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTN-201ENST00000348225 Q96MF0 132 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 PRSS46E5RG02 174 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 E7EUB6 86 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 PRH1P02810 166 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 RNASE2P10153 161 aaKnown RBP14.92□□□□□ -0.02
PTN-201ENST00000348225 C5orf64Q2M2E5 130 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 HSD17B13Q7Z5P4 300 aaPredicted RBP14.92□□□□□ -0.02
PTN-201ENST00000348225 C1RLQ9NZP8 487 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 TIMM9Q9Y5J7 89 aa14.92□□□□□ -0.02
PTN-201ENST00000348225 POLQO75417 2590 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 ABCA12Q86UK0 2595 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 IGHV3OR16-10A0A075B7F0 116 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 OR13C7P0DN81 318 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 FGF7P21781 194 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 S100A1P23297 94 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 WT1-ASQ06250 92 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 TUSC1Q2TAM9 212 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 AKR1C8PQ5T2L2 129 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 SRSF8Q9BRL6 282 aaKnown RBP14.91□□□□□ -0.02
PTN-201ENST00000348225 PARP11Q9NR21 331 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 PLA2G2EQ9NZK7 142 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 NAV2Q8IVL1 2488 aa14.91□□□□□ -0.02
PTN-201ENST00000348225 GCN1Q92616 2671 aaKnown RBP14.9□□□□□ -0.02
PTN-201ENST00000348225 CSMD2Q7Z408 3487 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 SMCO3A2RU48 225 aa14.9□□□□□ -0.02
PTN-201ENST00000348225 NCBP2LA6PVI3 153 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms