RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.68■□□□□ 0.1
UBE3C-201ENST00000348165 IGKV1D-33P01593 117 aa15.68■□□□□ 0.1
UBE3C-201ENST00000348165 IGKV1-33P01594 117 aa15.68■□□□□ 0.1
UBE3C-201ENST00000348165 MST1P26927 711 aa15.68■□□□□ 0.1
UBE3C-201ENST00000348165 CTAG1AP78358 180 aa15.68■□□□□ 0.1
UBE3C-201ENST00000348165 WDR25Q64LD2 544 aaPredicted RBP15.68■□□□□ 0.1
UBE3C-201ENST00000348165 OSR1Q8TAX0 266 aaPredicted RBP15.68■□□□□ 0.1
UBE3C-201ENST00000348165 FAM168AQ92567 244 aa15.68■□□□□ 0.1
UBE3C-201ENST00000348165 DOCK4Q8N1I0 1966 aa15.68■□□□□ 0.1
UBE3C-201ENST00000348165 CRXO43186 299 aaPredicted RBP15.68■□□□□ 0.1
UBE3C-201ENST00000348165 MT-ND6P03923 174 aa15.68■□□□□ 0.1
UBE3C-201ENST00000348165 IGKV1-9A0A0C4DH69 117 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 TFF1P04155 84 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 SRSF9Q13242 221 aaKnown RBP eCLIP15.67■□□□□ 0.16e-7■■□□□ 13
UBE3C-201ENST00000348165 PLPPR1Q8TBJ4 325 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 SEMA5BQ9P283 1151 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 RALGAPA2Q2PPJ7 1873 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 MSGN1A6NI15 193 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 TRGV3P03979 118 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 IGFBP3P17936 291 aaPredicted RBP15.67■□□□□ 0.1
UBE3C-201ENST00000348165 FGFBP3Q8TAT2 258 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 WFIKKN1Q96NZ8 548 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 THADAQ6YHU6 1953 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 TM4SF5O14894 197 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 DANCRP0C864 163 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 CKS2P33552 79 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 DLX1P56177 255 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 TMEM183AQ8IXX5 376 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 RNASE6Q93091 150 aaKnown RBP15.67■□□□□ 0.1
UBE3C-201ENST00000348165 PGLYRP4Q96LB8 373 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 RPRMQ9NS64 109 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 PCNX1Q96RV3 2341 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 LYNX1G3V0Z9 82 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 IGKV3-20P01619 116 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 LYNX1P0DP58 116 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 RELBQ01201 579 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 C17orf82Q86X59 251 aaPredicted RBP15.67■□□□□ 0.1
UBE3C-201ENST00000348165 SRSF12Q8WXF0 261 aaKnown RBP15.67■□□□□ 0.1
UBE3C-201ENST00000348165 SPSB4Q96A44 273 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 EEF1AKMT3Q96AZ1 226 aa15.67■□□□□ 0.1
UBE3C-201ENST00000348165 TGFAP01135 160 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 UCP1P25874 307 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 RRN3P1Q2M238 152 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 ZFP30Q9Y2G7 519 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 HERPUD1Q15011 391 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 GOLT1AQ6ZVE7 132 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 GATAD1Q8WUU5 269 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 C7orf69Q9H7B7 122 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 USF3Q68DE3 2245 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 BTF3P20290 206 aaKnown RBP15.66■□□□□ 0.1
UBE3C-201ENST00000348165 SLC25A34Q6PIV7 304 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 LYZL4Q96KX0 146 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 FOXF2Q12947 444 aa15.66■□□□□ 0.1
UBE3C-201ENST00000348165 IGHV3OR16-8A0A075B7F1 116 aa15.65■□□□□ 0.1
UBE3C-201ENST00000348165 MRPL20Q9BYC9 149 aaKnown RBP15.65■□□□□ 0.1
UBE3C-201ENST00000348165 GALNT14Q96FL9 552 aa15.65■□□□□ 0.1
UBE3C-201ENST00000348165 RTBDNQ9BSG5 229 aaPredicted RBP15.65■□□□□ 0.1
UBE3C-201ENST00000348165 SAPCD1Q5SSQ6 148 aa15.65■□□□□ 0.1
UBE3C-201ENST00000348165 PHLDA3Q9Y5J5 127 aa15.65■□□□□ 0.1
UBE3C-201ENST00000348165 LINC00271P0C7V0 271 aa15.65■□□□□ 0.1
UBE3C-201ENST00000348165 C2orf68Q2NKX9 166 aa15.65■□□□□ 0.1
UBE3C-201ENST00000348165 CX3CL1P78423 397 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 LINC00305Q7Z4B0 112 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 CD8AP01732 235 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 GPX1P07203 203 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 ZP1P60852 638 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 ZIC4Q8N9L1 334 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 IGHV3-66A0A0C4DH42 116 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 NMUP48645 174 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 OR10S1Q8NGN2 331 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 PARLQ9H300 379 aa15.64■□□□□ 0.09
UBE3C-201ENST00000348165 NYNRINQ9P2P1 1898 aaKnown RBP15.64■□□□□ 0.09
UBE3C-201ENST00000348165 PSG9Q00887 426 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 RELQ04864 619 aaPredicted RBP15.63■□□□□ 0.09
UBE3C-201ENST00000348165 MEF2CQ06413 473 aaPredicted RBP15.63■□□□□ 0.09
UBE3C-201ENST00000348165 KLHDC3Q9BQ90 382 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 PLSCR2Q9NRY7 297 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 ANOS1P23352 680 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 GCHFRP30047 84 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 C2orf83Q53S99 150 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 ZNF502Q8TBZ5 544 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 IFI27L2Q9H2X8 130 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 LINC00312Q9Y6C7 94 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 IL6RP08887 468 aaPredicted RBP15.63■□□□□ 0.09
UBE3C-201ENST00000348165 NEU1Q99519 415 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 AMY1AP04745 511 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 HOXA5P20719 270 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 NDUFAF3Q9BU61 184 aa15.63■□□□□ 0.09
UBE3C-201ENST00000348165 AGAP20933 346 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 KIAA1644Q3SXP7 199 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 WDR82Q6UXN9 313 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 C19orf24Q9BVV8 132 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 FBXL7Q9UJT9 491 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 DUX5Q96PT3 197 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 FOXA2Q9Y261 457 aaPredicted RBP15.62■□□□□ 0.09
UBE3C-201ENST00000348165 CYP2G1PQ6ZSU1 146 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 RAB37Q96AX2 223 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 RCC1LQ96I51 464 aaKnown RBP15.62■□□□□ 0.09
UBE3C-201ENST00000348165 RAX2Q96IS3 184 aa15.62■□□□□ 0.09
UBE3C-201ENST00000348165 ATP5IP56385 69 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms