RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 OR4D5Q8NGN0 318 aa8.81□□□□□ -1
SMG7-201ENST00000347615 FNDC1Q4ZHG4 1894 aaPredicted RBP8.81□□□□□ -1
SMG7-201ENST00000347615 LNP1A1A4G5 178 aa8.81□□□□□ -1
SMG7-201ENST00000347615 KLF7O75840 302 aaPredicted RBP8.81□□□□□ -1
SMG7-201ENST00000347615 PCP4P48539 62 aa8.81□□□□□ -1
SMG7-201ENST00000347615 FAM89BQ8N5H3 189 aa8.81□□□□□ -1
SMG7-201ENST00000347615 IMMP1LQ96LU5 166 aa8.81□□□□□ -1
SMG7-201ENST00000347615 PNRC2Q9NPJ4 139 aaKnown RBP8.81□□□□□ -1
SMG7-201ENST00000347615 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.8□□□□□ -1
SMG7-201ENST00000347615 C8orf88P0DMB2 117 aa8.8□□□□□ -1
SMG7-201ENST00000347615 KCNS1Q96KK3 526 aa8.8□□□□□ -1
SMG7-201ENST00000347615 RBM14Q96PK6 669 aaKnown RBP8.8□□□□□ -1
SMG7-201ENST00000347615 TUBA4BQ9H853 241 aa8.8□□□□□ -1
SMG7-201ENST00000347615 OR9G9P0C7N8 305 aa8.8□□□□□ -1
SMG7-201ENST00000347615 ASPHD1Q5U4P2 390 aa8.8□□□□□ -1
SMG7-201ENST00000347615 SPATA31B1PQ5VZV4 182 aa8.8□□□□□ -1
SMG7-201ENST00000347615 FAM53AQ6NSI3 398 aaPredicted RBP8.8□□□□□ -1
SMG7-201ENST00000347615 WDYHV1Q96HA8 205 aa8.8□□□□□ -1
SMG7-201ENST00000347615 ASCL2Q99929 193 aa8.8□□□□□ -1
SMG7-201ENST00000347615 PARD6GQ9BYG4 376 aaPredicted RBP8.8□□□□□ -1
SMG7-201ENST00000347615 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
SMG7-201ENST00000347615 TMEM56-RWDD3S4R434 201 aa8.8□□□□□ -1
SMG7-201ENST00000347615 A0A1B0GUS0 222 aa8.8□□□□□ -1
SMG7-201ENST00000347615 DLL1O00548 723 aa8.8□□□□□ -1
SMG7-201ENST00000347615 ZNF207O43670 478 aaKnown RBP8.8□□□□□ -1
SMG7-201ENST00000347615 LGALS7P47929 136 aa8.8□□□□□ -1
SMG7-201ENST00000347615 TAS2R60P59551 318 aa8.8□□□□□ -1
SMG7-201ENST00000347615 NABP1Q96AH0 204 aa8.8□□□□□ -1
SMG7-201ENST00000347615 A0A0G2JRQ6 117 aa8.8□□□□□ -1
SMG7-201ENST00000347615 FOXH1O75593 365 aa8.8□□□□□ -1
SMG7-201ENST00000347615 RNFT1Q5M7Z0 435 aa8.8□□□□□ -1
SMG7-201ENST00000347615 FAM166AQ6J272 317 aa8.8□□□□□ -1
SMG7-201ENST00000347615 MRPL14Q6P1L8 145 aaKnown RBP8.8□□□□□ -1
SMG7-201ENST00000347615 HIST1H2BLQ99880 126 aa8.8□□□□□ -1
SMG7-201ENST00000347615 TMEM189A5PLL7 270 aa8.8□□□□□ -1
SMG7-201ENST00000347615 LINC00271P0C7V0 271 aa8.8□□□□□ -1
SMG7-201ENST00000347615 FTH1P19P0C7X4 201 aa8.8□□□□□ -1
SMG7-201ENST00000347615 PYYP10082 97 aa8.8□□□□□ -1
SMG7-201ENST00000347615 SAXO1Q8IYX7 474 aa8.8□□□□□ -1
SMG7-201ENST00000347615 ZNF738Q8NE65 137 aa8.8□□□□□ -1
SMG7-201ENST00000347615 DEFB104AQ8WTQ1 72 aa8.8□□□□□ -1
SMG7-201ENST00000347615 TMEM45BQ96B21 275 aa8.8□□□□□ -1
SMG7-201ENST00000347615 DPRXA6NFQ7 191 aa8.79□□□□□ -1
SMG7-201ENST00000347615 CDX4O14627 284 aaPredicted RBP8.79□□□□□ -1
SMG7-201ENST00000347615 CCL3L1P16619 93 aa8.79□□□□□ -1
SMG7-201ENST00000347615 LHX2P50458 406 aa8.79□□□□□ -1
SMG7-201ENST00000347615 QRFPP83859 136 aa8.79□□□□□ -1
SMG7-201ENST00000347615 MBNL2Q5VZF2 373 aaKnown RBP8.79□□□□□ -1
SMG7-201ENST00000347615 RABAC1Q9UI14 185 aa8.79□□□□□ -1
SMG7-201ENST00000347615 CKS2P33552 79 aa8.79□□□□□ -1
SMG7-201ENST00000347615 CLDN18P56856 261 aa8.79□□□□□ -1
SMG7-201ENST00000347615 PYY3Q5JQD4 70 aa8.79□□□□□ -1
SMG7-201ENST00000347615 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
SMG7-201ENST00000347615 C20orf204Q6ZNR8 217 aa8.79□□□□□ -1
SMG7-201ENST00000347615 LHFPL1Q86WI0 220 aa8.79□□□□□ -1
SMG7-201ENST00000347615 GTF3AQ92664 365 aaKnown RBP8.79□□□□□ -1
SMG7-201ENST00000347615 PSMG3Q9BT73 122 aaPredicted RBP8.79□□□□□ -1
SMG7-201ENST00000347615 LRRK1Q38SD2 2015 aa8.79□□□□□ -1
SMG7-201ENST00000347615 NOTCH4Q99466 2003 aa8.79□□□□□ -1
SMG7-201ENST00000347615 GCSHP23434 173 aa8.79□□□□□ -1
SMG7-201ENST00000347615 C1orf185Q5T7R7 199 aa8.79□□□□□ -1
SMG7-201ENST00000347615 CYP2G1PQ6ZSU1 146 aa8.79□□□□□ -1
SMG7-201ENST00000347615 ZNF502Q8TBZ5 544 aa8.79□□□□□ -1
SMG7-201ENST00000347615 ZNF430Q9H8G1 570 aaPredicted RBP8.79□□□□□ -1
SMG7-201ENST00000347615 UQCR10Q9UDW1 63 aa8.79□□□□□ -1
SMG7-201ENST00000347615 METRNQ9UJH8 293 aa8.79□□□□□ -1
SMG7-201ENST00000347615 CENPFP49454 3210 aa8.79□□□□□ -1
SMG7-201ENST00000347615 TRBV6-7A0A0A0MS04 114 aa8.79□□□□□ -1
SMG7-201ENST00000347615 TRAV5A0A0B4J249 113 aa8.79□□□□□ -1
SMG7-201ENST00000347615 PTGDSP41222 190 aa8.79□□□□□ -1
SMG7-201ENST00000347615 SRSF9Q13242 221 aaKnown RBP eCLIP8.79□□□□□ -1
SMG7-201ENST00000347615 C7orf71A4D174 169 aa8.78□□□□□ -1
SMG7-201ENST00000347615 A8MWL6 223 aa8.78□□□□□ -1
SMG7-201ENST00000347615 PRR33A8MZF0 331 aa8.78□□□□□ -1
SMG7-201ENST00000347615 MPDU1O75352 247 aa8.78□□□□□ -1
SMG7-201ENST00000347615 PSMB2P49721 201 aa8.78□□□□□ -1
SMG7-201ENST00000347615 OR10W1Q8NGF6 305 aa8.78□□□□□ -1
SMG7-201ENST00000347615 IER2Q9BTL4 223 aa8.78□□□□□ -1
SMG7-201ENST00000347615 ZNF729A6NN14 1252 aaPredicted RBP8.78□□□□□ -1
SMG7-201ENST00000347615 ZNF716A6NP11 495 aa8.78□□□□□ -1
SMG7-201ENST00000347615 RPL30P62888 115 aaKnown RBP8.78□□□□□ -1
SMG7-201ENST00000347615 ZNF324BQ6AW86 544 aaPredicted RBP8.78□□□□□ -1
SMG7-201ENST00000347615 TCF24Q7RTU0 167 aa8.78□□□□□ -1
SMG7-201ENST00000347615 OR4B1Q8NGF8 309 aa8.78□□□□□ -1
SMG7-201ENST00000347615 OCC1Q8TAD7 63 aa8.78□□□□□ -1
SMG7-201ENST00000347615 LINC01560Q8TB33 94 aa8.78□□□□□ -1
SMG7-201ENST00000347615 DOCK11Q5JSL3 2073 aa8.78□□□□□ -1
SMG7-201ENST00000347615 TRAV3A0A0B4J244 114 aa8.78□□□□□ -1
SMG7-201ENST00000347615 FAM90A26D6RGX4 464 aa8.78□□□□□ -1
SMG7-201ENST00000347615 E9PQ18 207 aa8.78□□□□□ -1
SMG7-201ENST00000347615 F2RL2O00254 374 aa8.78□□□□□ -1
SMG7-201ENST00000347615 MST1LQ2TV78 715 aa8.78□□□□□ -1
SMG7-201ENST00000347615 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
SMG7-201ENST00000347615 THYN1Q9P016 225 aa8.78□□□□□ -1
SMG7-201ENST00000347615 CCL1P22362 96 aa8.78□□□□□ -1
SMG7-201ENST00000347615 TMEM256Q8N2U0 113 aa8.78□□□□□ -1
SMG7-201ENST00000347615 RAB1BQ9H0U4 201 aa8.78□□□□□ -1
SMG7-201ENST00000347615 CCL21O00585 134 aa8.78□□□□□ -1
SMG7-201ENST00000347615 HLA-DQA1P01909 254 aa8.78□□□□□ -1
SMG7-201ENST00000347615 CEACAM1P13688 526 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms