RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 OPN1MW3P0DN78 364 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 GNB1P62873 340 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 SPINK9Q5DT21 86 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 C1QL4Q86Z23 238 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 PUSL1Q8N0Z8 303 aaKnown RBP10.86□□□□□ -0.67
TPM4-202ENST00000344824 VSTM2AQ8TAG5 236 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 WIPF2Q8TF74 440 aaPredicted RBP10.86□□□□□ -0.67
TPM4-202ENST00000344824 ST6GAL2Q96JF0 529 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 RNF5Q99942 180 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 NEURL2Q9BR09 285 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 BET1LQ9NYM9 111 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 LSM5Q9Y4Y9 91 aaKnown RBP10.86□□□□□ -0.67
TPM4-202ENST00000344824 SPDEFO95238 335 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 IGHG2P01859 326 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 SLC35B1P78383 322 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 PJVKQ0ZLH3 352 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 CXorf66Q5JRM2 361 aaPredicted RBP10.85□□□□□ -0.67
TPM4-202ENST00000344824 STPG2Q8N412 459 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 TEX45Q8NA69 505 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 OR4F17Q8NGA8 305 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 OR8H1Q8NGG4 311 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 OR4D5Q8NGN0 318 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 OR2T35Q8NGX2 323 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 TMEM167AQ8TBQ9 72 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 OR4F4Q96R69 305 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 HSPB9Q9BQS6 159 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 NMES1Q9C002 83 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 MAGT1Q9H0U3 335 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 ZNF430Q9H8G1 570 aaPredicted RBP10.85□□□□□ -0.67
TPM4-202ENST00000344824 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.85□□□□□ -0.67
TPM4-202ENST00000344824 NOTCH3Q9UM47 2321 aa10.85□□□□□ -0.67
TPM4-202ENST00000344824 LINC01548A6NM66 108 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 C15orf61A6NNL5 157 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 AP4M1O00189 453 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 ST8SIA3O43173 380 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 KCNAB3O43448 404 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 NDUFA3O95167 84 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 IFNA17P01571 189 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 PF4P02776 101 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 CRYGBP07316 175 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 SLC25A6P12236 298 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 NKX2-1P43699 371 aaPredicted RBP10.84□□□□□ -0.67
TPM4-202ENST00000344824 RAP2BP61225 183 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 CYCSP99999 105 aaKnown RBP10.84□□□□□ -0.67
TPM4-202ENST00000344824 RAB32Q13637 225 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 TNXAQ16473 311 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 FAM71E2Q8N5Q1 922 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 NPBQ8NG41 125 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 OR4A5Q8NH83 315 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 PPP1R1CQ8WVI7 109 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 HINT2Q9BX68 163 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 PLSCR3Q9NRY6 295 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 OR51B2Q9Y5P1 312 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 TSSC4Q9Y5U2 329 aaPredicted RBP10.84□□□□□ -0.67
TPM4-202ENST00000344824 TNCP24821 2201 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 ADARB2-AS1A8MUL3 147 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 NUDT19A8MXV4 375 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 FCN1O00602 326 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 PITX3O75364 302 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 CA2P00918 260 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 MBPP02686 304 aaPredicted RBP10.84□□□□□ -0.67
TPM4-202ENST00000344824 POLR2GP62487 172 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM4-202ENST00000344824 RPL8P62917 257 aaKnown RBP10.84□□□□□ -0.67
TPM4-202ENST00000344824 PRSS8Q16651 343 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 C5orf64Q2M2E5 130 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 Q5BKY6 102 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 C10orf55Q5SWW7 151 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 C11orf87Q6NUJ2 197 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 ABHD5Q8WTS1 349 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 PARP11Q9NR21 331 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 PRNDQ9UKY0 176 aa10.84□□□□□ -0.67
TPM4-202ENST00000344824 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
TPM4-202ENST00000344824 K7EPK0 472 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 WRBO00258 174 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 SSSCA1O60232 199 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 ACTL6BO94805 426 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 IL6RP08887 468 aaPredicted RBP10.83□□□□□ -0.68
TPM4-202ENST00000344824 IAPPP10997 89 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 DEFA6Q01524 100 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 MMD2Q8IY49 270 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 COMMD5Q9GZQ3 224 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 RBKSQ9H477 322 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 COA4Q9NYJ1 87 aa10.83□□□□□ -0.68
TPM4-202ENST00000344824 FOXA2Q9Y261 457 aaPredicted RBP10.83□□□□□ -0.68
TPM4-202ENST00000344824 TRAV14DV4A0A0A6YYC5 116 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 CEBPZOSA8MTT3 80 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 CNIH1O95406 144 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 MPC2O95563 127 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 PSMB6P28072 239 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 TNFRSF9Q07011 255 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 IL15RAQ13261 267 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 LCNL1Q6ZST4 164 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 TMEM14BQ9NUH8 114 aa10.82□□□□□ -0.68
TPM4-202ENST00000344824 FXYD6-FXYD2A0A087WZ82 144 aa10.81□□□□□ -0.68
TPM4-202ENST00000344824 TEX50A0A1B0GTY4 177 aa10.81□□□□□ -0.68
TPM4-202ENST00000344824 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
TPM4-202ENST00000344824 APELAP0DMC3 54 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms