RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 J3QR06 171 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 SOD3P08294 240 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 FOXC1Q12948 553 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 SLC25A48Q6ZT89 311 aaKnown RBP12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 FABP1P07148 127 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 IGFBP2P18065 325 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 S100A2P29034 98 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 RTL8BQ17RB0 113 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 STPG3Q8N7X2 389 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 MRPL20Q9BYC9 149 aaKnown RBP12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 GPR61Q9BZJ8 451 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 PLEKHA3Q9HB20 300 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 FCN3O75636 299 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 HNF1AP20823 631 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 S100PP25815 95 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 TEPPQ6URK8 271 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 OR10A7Q8NGE5 316 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 PCGF1Q9BSM1 259 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 SEPSECSQ9HD40 501 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 GSN-AS1Q9NRJ2 163 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 MIOXQ9UGB7 285 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 LINC00312Q9Y6C7 94 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 ACTL6BO94805 426 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 TMPRSS3P57727 454 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 LRFN3Q9BTN0 628 aa12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 GAR1Q9NY12 217 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 LSM4Q9Y4Z0 139 aaKnown RBP12.17□□□□□ -0.46
VIPAS39-202ENST00000343765 SAA1P0DJI8 122 aaPredicted RBP12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 LYPD2Q6UXB3 125 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 OR10D4PQ8NGN7 298 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 CORO2AQ92828 525 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 RAB1CQ92928 201 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 LINC00587B1AMM8 73 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 PDE6DO43924 150 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 FOXH1O75593 365 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 STAG3L2P0CL84 134 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 STAG3L3P0CL85 134 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 RD3LP0DJH9 198 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 NBL1P41271 181 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 ZNF114Q8NC26 417 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 ELOVL5Q9NYP7 299 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 PRNDQ9UKY0 176 aa12.16□□□□□ -0.46
VIPAS39-202ENST00000343765 SCO2A0A1W2PP80 73 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 UPK2O00526 184 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 CXorf1O96002 111 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 S100A12P80511 92 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 EFNB3Q15768 340 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 OR10W1Q8NGF6 305 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 OR4X1Q8NH49 305 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 ZNF714Q96N38 554 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 GAL3ST2Q9H3Q3 398 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 PPIAL4EA0A075B759 164 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 PPIAL4DF5H284 164 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 C1QTNF9P0C862 333 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 PPIAL4FP0DN26 164 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 CHRNB4P30926 498 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 MLANAQ16655 118 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 CDPF1Q6NVV7 123 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 SPACA3Q8IXA5 215 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 WFIKKN1Q96NZ8 548 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 LINC00574Q9H8X3 128 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 KCNIP2Q9NS61 270 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 PPIAL4AQ9Y536 164 aa12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 YTHDF2Q9Y5A9 579 aaKnown RBP12.15□□□□□ -0.46
VIPAS39-202ENST00000343765 TEX50A0A1B0GTY4 177 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 PPP5D1E7EU14 171 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 GATA2P23769 480 aaPredicted RBP12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 FAM3BP58499 235 aaPredicted RBP12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 DIAPH2-AS1Q14236 149 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 PYY3Q5JQD4 70 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 LINC01551Q86U37 167 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 HIST3H2BBQ8N257 126 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 TMEM178BH3BS89 294 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 PHOX2AO14813 284 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 FABP4P15090 132 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 PRCDQ00LT1 54 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 RAB31Q13636 194 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 ASCL5Q7RTU5 278 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 DYNLRB1Q9NP97 96 aa12.14□□□□□ -0.47
VIPAS39-202ENST00000343765 POU2AF1Q16633 256 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 A0A0U1RQK1 487 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 GCHFRP30047 84 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 FAM78BQ5VT40 261 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 ANAPC16Q96DE5 110 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 TRBV20OR9-2A0A075B6H5 130 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 VENTXO95231 258 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 APOA2P02652 100 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 FAM87AP0C7U9 286 aa12.13□□□□□ -0.47
VIPAS39-202ENST00000343765 RHOBP62745 196 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms