RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 GNPNAT1Q96EK6 184 aaPredicted RBP6.01□□□□□ -1.45
ZNF540-202ENST00000343599 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 AP5S1Q9NUS5 200 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 TRAV27A0A087WT01 109 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 TMED7-TICAM2A0A0A6YYA0 188 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 GLOD5A6NK44 160 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 TNFSF11O14788 317 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 KBTBD11O94819 623 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 VENTXO95231 258 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 GHRHP01286 108 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 HLA-HP01893 362 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 GPX1P07203 203 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 HIST1H1CP16403 213 aaKnown RBP6.01□□□□□ -1.45
ZNF540-202ENST00000343599 ADMP35318 185 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 DUSP2Q05923 314 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 PHYHD1Q5SRE7 291 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 C1orf100Q5SVJ3 147 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 GLYATL3Q5SZD4 288 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 TEX36Q5VZQ5 186 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 OR8I2Q8N0Y5 310 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 CNEP1R1Q8N9A8 125 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 CSNK2A3Q8NEV1 391 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 OR5A2Q8NGI9 324 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 FAM46BQ96A09 425 aa6.01□□□□□ -1.45
ZNF540-202ENST00000343599 PEF1Q9UBV8 284 aaKnown RBP6.01□□□□□ -1.45
ZNF540-202ENST00000343599 DUXBA0A1W2PPF3 345 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 HAND1O96004 215 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 LCN6P62502 163 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 MFGE8Q08431 387 aaPredicted RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 SMAGPQ0VAQ4 97 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 CCDC144NLQ6NUI1 221 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 LYPD6Q86Y78 171 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 ZNF676Q8N7Q3 588 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 EMG1Q92979 244 aaKnown RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 GNG13Q9P2W3 67 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 SAA2-SAA4A0A096LPE2 208 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 ZNF253O75346 499 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 RBMXP38159 391 aaKnown RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 MDH2P40926 338 aaKnown RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 CDKN2AP42771 156 aaKnown RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 SSBP2P81877 361 aaPredicted RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 EWSR1Q01844 656 aaKnown RBP eCLIP6□□□□□ -1.45
ZNF540-202ENST00000343599 TMEM267Q0VDI3 215 aaPredicted RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 LINC01590Q5TEZ4 76 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 DPY19L4Q7Z388 723 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 SIGLECL1Q8N7X8 197 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 OR4K13Q8NH42 304 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 C11orf1Q9H5F2 150 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 HIF1ANQ9NWT6 349 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 ZNF443Q9Y2A4 671 aaPredicted RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 KCNE3Q9Y6H6 103 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 SCN3AQ9NY46 2000 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 MYO9AB2RTY4 2548 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 TRAV8-6A0A0B4J262 113 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 IGHV4-61A0A0C4DH41 118 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 SIRPB1O00241 398 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 SH2D1BO14796 132 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 RBMXL2O75526 392 aaKnown RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 WNT2P09544 360 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 PI3P19957 117 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 UCP1P25874 307 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 S100GP29377 79 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 SFTPDP35247 375 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 ZNF93P35789 620 aaPredicted RBP6□□□□□ -1.45
ZNF540-202ENST00000343599 KRTDAPP60985 99 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 MARCH3Q86UD3 253 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 RTN4RL2Q86UN3 420 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 NDUFA11Q86Y39 141 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 OR4N2Q8NGD1 307 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 OR13G1Q8NGZ3 307 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 SLC25A40Q8TBP6 338 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 ASCL2Q99929 193 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 GTSF1LQ9H1H1 148 aa6□□□□□ -1.45
ZNF540-202ENST00000343599 BGLAPP02818 100 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 KIR2DS4P43632 304 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 PMCHL1Q16048 86 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 SRSF7Q16629 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
ZNF540-202ENST00000343599 MBD3L1Q8WWY6 194 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 C4orf45Q96LM5 186 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 SMIM7Q9BQ49 75 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 GEMIN7Q9H840 131 aaKnown RBP5.99□□□□□ -1.45
ZNF540-202ENST00000343599 NPVFQ9HCQ7 196 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 SLC7A10Q9NS82 523 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 MED31Q9Y3C7 131 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 PCNX3Q9H6A9 2034 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 TRBV7-9A0A0J9YWB2 115 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 CGB1A6NKQ9 187 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 MPPED1O15442 326 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 HMGN2P05204 90 aaKnown RBP5.99□□□□□ -1.45
ZNF540-202ENST00000343599 HERV-K104P63124 156 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 QRFPP83859 136 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 CD69Q07108 199 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 SAMD10Q9BYL1 202 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 NECAP2Q9NVZ3 263 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 JPT1Q9UK76 154 aa5.99□□□□□ -1.45
ZNF540-202ENST00000343599 TRAV9-2A0A087WT02 112 aa5.98□□□□□ -1.45
ZNF540-202ENST00000343599 KIR2DS1A0A191URI9 304 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms