RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 C17orf51A8MQB3 221 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 PPIAL4DF5H284 164 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 LIPFP07098 398 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 PPIAL4FP0DN26 164 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 COX8AP10176 69 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 CRYGSP22914 178 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 RAB9AP51151 201 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 CATR1Q13166 79 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 GABRA6Q16445 453 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 GAB4Q2WGN9 574 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 KIAA1644Q3SXP7 199 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 CENPWQ5EE01 88 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 IBA57Q5T440 356 aaKnown RBP6.79□□□□□ -1.32
ATG4A-201ENST00000343524 S100A7AQ86SG5 101 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 VSTM2AQ8TAG5 236 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 TMEM54Q969K7 222 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 FER1L6-AS2Q96M78 137 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 GPHA2Q96T91 129 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 MAP1LC3CQ9BXW4 147 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 NPVFQ9HCQ7 196 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 TMEM167BQ9NRX6 74 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 TNFRSF19Q9NS68 423 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 MTCH1Q9NZJ7 389 aa6.79□□□□□ -1.32
ATG4A-201ENST00000343524 ERRFI1Q9UJM3 462 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-201ENST00000343524 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 DOCK8Q8NF50 2099 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 TRAV38-1A0A0B4J264 116 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 IGKV1-6A0A0C4DH72 117 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 hCG_38984A0A1B0GV85 526 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SERTM2A0A1B0GWG4 89 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 HELTA6NFD8 242 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 APOA2P02652 100 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 OR9G9P0C7N8 305 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 FABP2P12104 132 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 GCHFRP30047 84 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 YPEL5P62699 121 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 C5orf64Q2M2E5 130 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 C1orf229Q6ZS94 237 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SFTPA2Q8IWL1 248 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SFTPA1Q8IWL2 248 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 MKXQ8IYA7 352 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 FGFRL1Q8N441 504 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 TMEM251Q8N6I4 163 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 ZNF645Q8N7E2 425 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 WDR31Q8NA23 367 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 CCL4L1Q8NHW4 92 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 TSACCQ96A04 125 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 NABP1Q96AH0 204 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 C5orf30Q96GV9 206 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 HSPB8Q9UJY1 196 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 PILRBQ9UKJ0 227 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 KCNS2Q9ULS6 477 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 ANKRD17O75179 2603 aaKnown RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 A0A0G2JLM5 398 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SHISA8B8ZZ34 492 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SLC31A1O15431 190 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 DHHO43323 396 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 OTX2P32243 289 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 RAB31Q13636 194 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 IZUMO4Q1ZYL8 232 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 ZNF585BQ52M93 769 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 XP32Q5T750 250 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 FAM27BQ5VT28 67 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 OR2T6Q8NHC8 308 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 FAM222BQ8WU58 562 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 ST6GALNAC6Q969X2 333 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SPATA25Q9BR10 227 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SLC25A10Q9UBX3 287 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 RARRES3Q9UL19 164 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 YTHDF2Q9Y5A9 579 aaKnown RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SOX21Q9Y651 276 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-201ENST00000343524 SPCS1Q9Y6A9 102 aa6.78□□□□□ -1.32
ATG4A-201ENST00000343524 GOLGA4Q13439 2230 aaKnown RBP6.77□□□□□ -1.32
ATG4A-201ENST00000343524 IGLV3-32A0A0A0MS00 114 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 ANKRD30BLA7E2S9 258 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 F2RL2O00254 374 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 SIVA1O15304 175 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 EDDM3BP56851 147 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 FOXL2P58012 376 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 FAM231DQ6ZW35 169 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 SPACA3Q8IXA5 215 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 OR9G4Q8NGQ1 327 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 OR4A16Q8NH70 328 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 SLC37A2Q8TED4 501 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 TRIB1Q96RU8 372 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 FNDC4Q9H6D8 234 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-201ENST00000343524 CRIM1Q9NZV1 1036 aa6.77□□□□□ -1.33
ATG4A-201ENST00000343524 A0A1W2PPM0 123 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 C22orf46C9J442 243 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 CLDN14O95500 239 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 P0C879 139 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 GATA2P23769 480 aaPredicted RBP6.76□□□□□ -1.33
ATG4A-201ENST00000343524 HHEXQ03014 270 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 SLAQ13239 276 aa6.76□□□□□ -1.33
ATG4A-201ENST00000343524 RSPO1Q2MKA7 263 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms