RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 WNT10AQ9GZT5 417 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 SH3BGRL3Q9H299 93 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 HIST1H2BAQ96A08 127 aa12.63□□□□□ -0.39
UBE3B-202ENST00000342494 SPTBP11277 2137 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 NTN3O00634 580 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-202ENST00000342494 AGAP20933 346 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 UNQ6494/PRO21346Q6UXR6 183 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 STHQ8IWL8 128 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 OR10AG1Q8NH19 301 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 TM2D1Q9BX74 207 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 C11orf44Q8N8P7 122 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 OR4D5Q8NGN0 318 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 DMRTA2Q96SC8 542 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 HIST1H4GQ99525 98 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 SPRR3Q9UBC9 169 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 GGCTO75223 188 aaKnown RBP12.62□□□□□ -0.39
UBE3B-202ENST00000342494 DSCR9P59020 149 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 MARVELD3Q96A59 401 aa12.62□□□□□ -0.39
UBE3B-202ENST00000342494 A0A0G2JK05 382 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 WDR82Q6UXN9 313 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 FBLIM1Q8WUP2 373 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 CFHR1Q03591 330 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 SCGB1A1P11684 91 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 RND3P61587 244 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 C2orf68Q2NKX9 166 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 NSUN5P1Q3KNT7 163 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 SAMD13Q5VXD3 122 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 RARRES2Q99969 163 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 TMEM133Q9H2Q1 129 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 RPRMQ9NS64 109 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 TRAV40A0A0B4J280 105 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 IGFBP2P18065 325 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 SRIP30626 198 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 LDLRAD2Q5SZI1 272 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 ZNF660Q6AZW8 331 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-202ENST00000342494 C7orf71A4D174 169 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 FBLL1A6NHQ2 334 aaKnown RBP12.61□□□□□ -0.39
UBE3B-202ENST00000342494 CENPWQ5EE01 88 aa12.61□□□□□ -0.39
UBE3B-202ENST00000342494 ZNF383Q8NA42 475 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 BRWD3Q6RI45 1802 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 TRGC2P03986 189 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 ALKBH7Q9BT30 221 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-202ENST00000342494 GGACTQ9BVM4 153 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 PARLQ9H300 379 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 MDC1Q14676 2089 aaKnown RBP12.6□□□□□ -0.39
UBE3B-202ENST00000342494 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 GNLYP22749 145 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 CD24P25063 80 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 NPCDR1Q9BY65 106 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 MYOFQ9NZM1 2061 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
UBE3B-202ENST00000342494 HINT1P49773 126 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-202ENST00000342494 PSMG3Q9BT73 122 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-202ENST00000342494 AICDAQ9GZX7 198 aa12.6□□□□□ -0.39
UBE3B-202ENST00000342494 ZNFX1Q9P2E3 1918 aaKnown RBP12.59□□□□□ -0.39
UBE3B-202ENST00000342494 GPX4P36969 197 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-202ENST00000342494 IFITM3Q01628 133 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
UBE3B-202ENST00000342494 WBP1Q96G27 269 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 ZFC3H1O60293 1989 aaKnown RBP12.59□□□□□ -0.39
UBE3B-202ENST00000342494 IGHV1-18A0A0C4DH31 117 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 PQLC2LA1A4F0 135 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 KIAA1644Q3SXP7 199 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 GCSAMLQ5JQS6 135 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 ERASQ7Z444 233 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 OR52E5Q8NH55 327 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 GPR61Q9BZJ8 451 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 PINLYPA6NC86 204 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-202ENST00000342494 SDF2L1Q9HCN8 221 aa12.59□□□□□ -0.39
UBE3B-202ENST00000342494 SAA2-SAA4A0A096LPE2 208 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 SAA2P0DJI9 122 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-202ENST00000342494 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 SMIM6P0DI80 62 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 HBBP68871 147 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 PMCHL1Q16048 86 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 NMBP08949 121 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 OTX1P32242 354 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-202ENST00000342494 H2BFSP57053 126 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 REC114Q7Z4M0 266 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 GTSCR1Q86UQ5 136 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 CACNG8Q8WXS5 425 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 SFRP2Q96HF1 295 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 TMEM170BQ5T4T1 132 aa12.58□□□□□ -0.4
UBE3B-202ENST00000342494 WNT2P09544 360 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 DANCRP0C864 163 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 PAX1P15863 534 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 EGR1P18146 543 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 TIMP3P35625 211 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 ZNF385CQ66K41 422 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-202ENST00000342494 CGAP01215 116 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 UCP1P25874 307 aa12.57□□□□□ -0.4
UBE3B-202ENST00000342494 NRXN2Q9P2S2 1712 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms