RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 OR10P1Q8NGE3 313 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 SAT2Q96F10 170 aaPredicted RBP13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 CLCC1Q96S66 551 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 RNF5Q99942 180 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 WDR61Q9GZS3 305 aaKnown RBP13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 PLEKHA3Q9HB20 300 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 TBL2Q9Y4P3 447 aaKnown RBP13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 ABCA1O95477 2261 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 UBE2L5PA0A1B0GUS4 154 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 IFNA5P01569 189 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 FHITP49789 147 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 ATP6V1FQ16864 119 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 ETV3LQ6ZN32 361 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 TMEM182Q6ZP80 229 aaPredicted RBP13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 SLC24A4Q8NFF2 622 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 OR2G3Q8NGZ4 309 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 EAF1Q96JC9 268 aaPredicted RBP13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 TMEM147Q9BVK8 224 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 COMMD5Q9GZQ3 224 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 FBXL15Q9H469 300 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 BEX4Q9NWD9 120 aaPredicted RBP13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 CSMD1Q96PZ7 3565 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 ANKRD34BA5PLL1 514 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 INS-IGF2F8WCM5 200 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 OR8U8P0C7N1 319 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 RNASE2P10153 161 aaKnown RBP13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 NPY1RP25929 384 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 SAA4P35542 130 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 LGALS4P56470 323 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 WT1-ASQ06250 92 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 DEFB113Q30KQ7 82 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 PXDC1Q5TGL8 231 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 Q8N6K4 173 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 PINX1Q96BK5 328 aaKnown RBP13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 GNPNAT1Q96EK6 184 aaPredicted RBP13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 ENY2Q9NPA8 101 aa13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 METTL1Q9UBP6 276 aaKnown RBP13.72□□□□□ -0.21
FRMD4A-202ENST00000342409 PDZD2O15018 2839 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 FCN1O00602 326 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 MSMBP08118 114 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 SNRNP70P08621 437 aaKnown RBP13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 S100A1P23297 94 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 HNF4GQ14541 408 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 AANATQ16613 207 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 BTNL8Q6UX41 500 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 TAF15Q92804 592 aaKnown RBP eCLIP13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 UQCC1Q9NVA1 299 aa13.71□□□□□ -0.21
FRMD4A-202ENST00000342409 NPFFO15130 113 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 NDUFA3O95167 84 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 MOSP00540 346 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 RPP30P78346 268 aaKnown RBP13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 EBI3Q14213 229 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 CCDC144NLQ6NUI1 221 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 Q6ZRG5 221 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 PPP1R27Q86WC6 154 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 MMD2Q8IY49 270 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 NPBQ8NG41 125 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 MALSU1Q96EH3 234 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 PARP11Q9NR21 331 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 PFDN2Q9UHV9 154 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 TUSC1Q2TAM9 212 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 C2orf83Q53S99 150 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 CSPG4Q6UVK1 2322 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 CENPVQ7Z7K6 275 aaPredicted RBP13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 LRRC75A-AS1Q8N1F1 130 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 LYPD6BQ8NI32 183 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 SCGB1C1Q8TD33 95 aa13.7□□□□□ -0.22
FRMD4A-202ENST00000342409 ITPR2Q14571 2701 aa13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 IGLC7A0M8Q6 106 aa13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 COMPP49747 757 aaPredicted RBP13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 FAM120AOSQ5T036 256 aa13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 RUSC1-AS1Q66K80 236 aa13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 SLC25A24Q6NUK1 477 aa13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 HSD17B13Q7Z5P4 300 aaPredicted RBP13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 PSMG3Q9BT73 122 aaPredicted RBP13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 FBXO7Q9Y3I1 522 aa13.69□□□□□ -0.22
FRMD4A-202ENST00000342409 PRRC2AP48634 2157 aaKnown RBP13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 IGHV3OR16-10A0A075B7F0 116 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 B4DSR2 109 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 NBR2O15453 112 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 SCAF4O95104 1147 aaKnown RBP13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 IFNA4P05014 189 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 RAB11AP62491 216 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 DLK1P80370 383 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 MMDQ15546 238 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 TNXAQ16473 311 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 ARSJQ5FYB0 599 aaPredicted RBP13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 EIF4E3Q8N5X7 224 aaKnown RBP13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 OR2T10Q8NGZ9 312 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 GGACTQ9BVM4 153 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 VSIRQ9H7M9 311 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 WDR83OSQ9Y284 106 aa13.68□□□□□ -0.22
FRMD4A-202ENST00000342409 IGHV1-69DA0A0B4J2H0 117 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 TEX22C9J3V5 150 aa13.67□□□□□ -0.22
FRMD4A-202ENST00000342409 TRIM77I1YAP6 450 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms