RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 CCL13Q99616 98 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
TDP2-201ENST00000341060 PRNDQ9UKY0 176 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 ZNF257Q9Y2Q1 563 aa11.93□□□□□ -0.5
TDP2-201ENST00000341060 RP1L1Q8IWN7 2480 aaPredicted RBP11.93□□□□□ -0.5
TDP2-201ENST00000341060 PGPEP1LA6NFU8 196 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 A8MXE2 369 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 AMBPP02760 352 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 C1QTNF9P0C862 333 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 FAM78BQ5VT40 261 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 RBMXL3Q8N7X1 1067 aaKnown RBP11.92□□□□□ -0.5
TDP2-201ENST00000341060 DEFB108BQ8NET1 73 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 NUP37Q8NFH4 326 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 SFRP2Q96HF1 295 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 CHODLQ9H9P2 273 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 AURKAIP1Q9NWT8 199 aaPredicted RBP11.92□□□□□ -0.5
TDP2-201ENST00000341060 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
TDP2-201ENST00000341060 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 OR51B2Q9Y5P1 312 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 SCO2A0A1W2PP80 73 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 ZZEF1O43149 2961 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 MMP23AO75900 390 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 IL3RAP26951 378 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 GCHFRP30047 84 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 PRR20EP86478 221 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 PRR20CP86479 221 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 PRR20DP86480 221 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 PRR20BP86481 221 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 PRR20AP86496 221 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 FOXL1Q12952 345 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 GAMTQ14353 236 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 C9orf152Q5JTZ5 239 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 OR5R1Q8NH85 324 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 FAM57AQ8TBR7 257 aa11.92□□□□□ -0.5
TDP2-201ENST00000341060 YTHDF2Q9Y5A9 579 aaKnown RBP11.92□□□□□ -0.5
TDP2-201ENST00000341060 DVL1O14640 695 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 CT45A6P0DMU7 189 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 CT45A5P0DMU8 189 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 CT45A7P0DMV0 189 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 CCKARP32238 428 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 PRCDQ00LT1 54 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 TMEM204Q9BSN7 226 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 ZGRF1Q86YA3 2104 aa11.91□□□□□ -0.5
TDP2-201ENST00000341060 J3QR06 171 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 MT-CO2P00403 227 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 IGKV1-16P04430 117 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 IRF2P14316 349 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 MYOD1P15172 320 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 IGFBP2P18065 325 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 KRTCAP3Q53RY4 240 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 LINC00312Q9Y6C7 94 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 BSNQ9UPA5 3926 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 SMG1Q96Q15 3661 aaKnown RBP11.9□□□□□ -0.5
TDP2-201ENST00000341060 IGF2RP11717 2491 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 hADV38S2A0JD32 116 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 K7EM74 188 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 UPK2O00526 184 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 GATCO43716 136 aaKnown RBP11.9□□□□□ -0.5
TDP2-201ENST00000341060 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
TDP2-201ENST00000341060 JOSD1Q15040 202 aaPredicted RBP11.9□□□□□ -0.5
TDP2-201ENST00000341060 SPATA31B1PQ5VZV4 182 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 HINT2Q9BX68 163 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 SLC35D1Q9NTN3 355 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 DCAF16Q9NXF7 216 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 TP53TG5Q9Y2B4 290 aa11.9□□□□□ -0.5
TDP2-201ENST00000341060 RPL31P62899 125 aaKnown RBP11.89□□□□□ -0.51
TDP2-201ENST00000341060 TMEM108Q6UXF1 575 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
TDP2-201ENST00000341060 BET1LQ9NYM9 111 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 SRRM4A7MD48 611 aaKnown RBP11.89□□□□□ -0.51
TDP2-201ENST00000341060 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 TEX38Q6PEX7 206 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 SGMS2Q8NHU3 365 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 C11orf52Q96A22 123 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
TDP2-201ENST00000341060 A0A0U1RQK1 487 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 ZNF320A2RRD8 509 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 NKX6-3A6NJ46 265 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 LINC00869P0C866 280 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 CNN1P51911 297 aaKnown RBP11.88□□□□□ -0.51
TDP2-201ENST00000341060 ATP5IP56385 69 aaPredicted RBP11.88□□□□□ -0.51
TDP2-201ENST00000341060 PKIAP61925 76 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 CCL8P80075 99 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 ZNF833PQ6ZTB9 187 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 OR4P4Q8NGL7 312 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 OR5B3Q8NH48 314 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 GAL3ST2Q9H3Q3 398 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 ELOVL5Q9NYP7 299 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
TDP2-201ENST00000341060 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
TDP2-201ENST00000341060 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms