RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MRPS14O60783 128 aaKnown RBP11.79□□□□□ -0.52
NECTIN1-202ENST00000340882 CDK2AP2O75956 126 aa11.79□□□□□ -0.52
NECTIN1-202ENST00000340882 CMC4P56277 68 aaPredicted RBP11.79□□□□□ -0.52
NECTIN1-202ENST00000340882 C12orf74Q32Q52 190 aa11.79□□□□□ -0.52
NECTIN1-202ENST00000340882 TMEM203Q969S6 136 aa11.79□□□□□ -0.52
NECTIN1-202ENST00000340882 BET1LQ9NYM9 111 aa11.79□□□□□ -0.52
NECTIN1-202ENST00000340882 TAS2R8Q9NYW2 309 aa11.79□□□□□ -0.52
NECTIN1-202ENST00000340882 C15orf62A8K5M9 175 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 CD36P16671 472 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 DEFB131AP59861 70 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 Q6ZS49 121 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 TMEM116Q8NCL8 245 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 OR10R2Q8NGX6 335 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 SCARB1Q8WTV0 552 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 CYGBQ8WWM9 190 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 HRASLSQ9HDD0 168 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 THYN1Q9P016 225 aa11.78□□□□□ -0.52
NECTIN1-202ENST00000340882 ZNF705EA8MWA4 302 aaPredicted RBP11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 HRASP01112 189 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 HIST1H1DP16402 221 aaKnown RBP11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 C4BPBP20851 252 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 WT1-ASQ06250 92 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 HES5Q5TA89 166 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 SPSB3Q6PJ21 355 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 Q6ZRM9 215 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 LILRB2Q8N423 598 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 UBAC2Q8NBM4 344 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 GIMAP1Q8WWP7 306 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 C21orf62Q9NYP8 219 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 RAB22AQ9UL26 194 aa11.77□□□□□ -0.53
NECTIN1-202ENST00000340882 C16orf90A8MZG2 172 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 UPK2O00526 184 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 CTSGP08311 255 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 MIFP14174 115 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 Q8N1X5 172 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 PQLC1Q8N2U9 271 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 GDPD1Q8N9F7 314 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 NDUFAF3Q9BU61 184 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 FKBP14Q9NWM8 211 aa11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 LSM2Q9Y333 95 aaKnown RBP11.76□□□□□ -0.53
NECTIN1-202ENST00000340882 K7EIM0 57 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 TNFSF12O43508 249 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 ATP5HO75947 161 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 CD74P04233 296 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 SERPINE2P07093 398 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 GNAO1P09471 354 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 OR13C7P0DN81 318 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 OR10C1Q96KK4 312 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 S100A14Q9HCY8 104 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 CLEC5AQ9NY25 188 aa11.75□□□□□ -0.53
NECTIN1-202ENST00000340882 NUPL2O15504 423 aaKnown RBP11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 APOHP02749 345 aaPredicted RBP11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 TALDO1P37837 337 aa11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 RPS25P62851 125 aaKnown RBP11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 TNP2Q05952 138 aa11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 Q56UQ5 140 aa11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 LIPKQ5VXJ0 399 aa11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 TRPT1Q86TN4 253 aaKnown RBP11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 BPIFB6Q8NFQ5 453 aa11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 QTRT1Q9BXR0 403 aaKnown RBP11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 MS4A6AQ9H2W1 248 aa11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 PLCXD1Q9NUJ7 323 aa11.74□□□□□ -0.53
NECTIN1-202ENST00000340882 SLC22A5O76082 557 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 IFNA10P01566 189 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 ZNF66Q6ZN08 573 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 STHQ8IWL8 128 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 SPAG16Q8N0X2 631 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 CSNK1G2-AS1Q8NCQ2 148 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 ST8SIA2Q92186 375 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 SRSF8Q9BRL6 282 aaKnown RBP11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 COMMD5Q9GZQ3 224 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 CCL28Q9NRJ3 127 aa11.73□□□□□ -0.53
NECTIN1-202ENST00000340882 TEX50A0A1B0GTY4 177 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 YIF1AO95070 293 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 GADD45AP24522 165 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 SPHARQ15513 63 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 SSX1Q16384 188 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 DGCR14Q96DF8 476 aaKnown RBP11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 CMTM3Q96MX0 182 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 MND1Q9BWT6 205 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 SCRT2Q9NQ03 307 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 TMEM140Q9NV12 185 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 V9GY05 133 aa11.72□□□□□ -0.53
NECTIN1-202ENST00000340882 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 IGHV3-66A0A0C4DH42 116 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 KNCNA6PVL3 124 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 SULT1C2O00338 296 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 DFFBO76075 338 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 TRAPPC2P0DI81 140 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 TRAPPC2BP0DI82 140 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 DTYMKP23919 212 aa11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.53
NECTIN1-202ENST00000340882 OR10A3P58181 314 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms