RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 INSP01308 110 aa11.01□□□□□ -0.65
USP47-202ENST00000339865 REPIN1Q9BWE0 567 aaKnown RBP11.01□□□□□ -0.65
USP47-202ENST00000339865 NRN1Q9NPD7 142 aa11.01□□□□□ -0.65
USP47-202ENST00000339865 TOGARAM1Q9Y4F4 1720 aa11□□□□□ -0.65
USP47-202ENST00000339865 LILRA5A6NI73 299 aa11□□□□□ -0.65
USP47-202ENST00000339865 CD8AP01732 235 aa11□□□□□ -0.65
USP47-202ENST00000339865 PRSS53Q2L4Q9 553 aa11□□□□□ -0.65
USP47-202ENST00000339865 ITGB4P16144 1822 aa11□□□□□ -0.65
USP47-202ENST00000339865 ZNF729A6NN14 1252 aaPredicted RBP11□□□□□ -0.65
USP47-202ENST00000339865 NAA38Q9BRA0 125 aaKnown RBP11□□□□□ -0.65
USP47-202ENST00000339865 CGAP01215 116 aa11□□□□□ -0.65
USP47-202ENST00000339865 UCNP55089 124 aa11□□□□□ -0.65
USP47-202ENST00000339865 CD69Q07108 199 aa11□□□□□ -0.65
USP47-202ENST00000339865 LRP10Q7Z4F1 713 aa11□□□□□ -0.65
USP47-202ENST00000339865 OR4X2Q8NGF9 303 aa11□□□□□ -0.65
USP47-202ENST00000339865 OR9G4Q8NGQ1 327 aa11□□□□□ -0.65
USP47-202ENST00000339865 EEF1AKMT3Q96AZ1 226 aa11□□□□□ -0.65
USP47-202ENST00000339865 LOXL4Q96JB6 756 aa11□□□□□ -0.65
USP47-202ENST00000339865 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
USP47-202ENST00000339865 LIPT2A6NK58 231 aa11□□□□□ -0.65
USP47-202ENST00000339865 GCHFRP30047 84 aa11□□□□□ -0.65
USP47-202ENST00000339865 HOXD3P31249 432 aaPredicted RBP11□□□□□ -0.65
USP47-202ENST00000339865 EFNB1P98172 346 aa11□□□□□ -0.65
USP47-202ENST00000339865 C19orf24Q9BVV8 132 aa11□□□□□ -0.65
USP47-202ENST00000339865 ARFGEF1Q9Y6D6 1849 aa11□□□□□ -0.65
USP47-202ENST00000339865 CA7P43166 264 aa11□□□□□ -0.65
USP47-202ENST00000339865 RIPPLY2Q5TAB7 128 aa11□□□□□ -0.65
USP47-202ENST00000339865 ATAD5Q96QE3 1844 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 PRB3Q04118 309 aaPredicted RBP10.99□□□□□ -0.65
USP47-202ENST00000339865 SRSF7Q16629 238 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP47-202ENST00000339865 ST6GALNAC2Q9UJ37 374 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 DOCK1Q14185 1865 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 SERF1AO75920 110 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 HMGA2P52926 109 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 C2orf82Q6UX34 121 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 NPIPB3Q92617 1050 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 NTN1O95631 604 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 HSPE1P61604 102 aaKnown RBP10.99□□□□□ -0.65
USP47-202ENST00000339865 C2orf68Q2NKX9 166 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 C3orf36Q3SXR2 165 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 LINC01587Q99440 93 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 MRPL32Q9BYC8 188 aaKnown RBP10.99□□□□□ -0.65
USP47-202ENST00000339865 TMEM74BQ9NUR3 256 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 PATJQ8NI35 1801 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 BGLAPP02818 100 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 HMGA1P17096 107 aaKnown RBP10.99□□□□□ -0.65
USP47-202ENST00000339865 FGF12P61328 243 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 TJP1Q07157 1748 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 C5P01031 1676 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 UCP3P55916 312 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 PGLYRP1O75594 196 aaPredicted RBP10.99□□□□□ -0.65
USP47-202ENST00000339865 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
USP47-202ENST00000339865 MPV17P39210 176 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 SEC11AP67812 179 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 FER1L6-AS1Q8NA97 138 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 NHLRC3Q5JS37 347 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 SELENOHQ8IZQ5 122 aaKnown RBP10.98□□□□□ -0.65
USP47-202ENST00000339865 NDUFAF3Q9BU61 184 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 IL9P15248 144 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 S4R3C0 116 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 OR2H2O95918 312 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 GLRXP35754 106 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 PGFP49763 221 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 C1orf43Q9BWL3 253 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 CLEC7AQ9BXN2 247 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 ERVK11-1P61568 191 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 A0A0G2JLM5 398 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 ZNHIT1O43257 154 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 ADMP35318 185 aa10.98□□□□□ -0.65
USP47-202ENST00000339865 GLMPQ8WWB7 406 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 USF3Q68DE3 2245 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 C16orf97H3BN30 126 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 CRYGNQ8WXF5 182 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 FGF11Q92914 225 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 RASL10BQ96S79 203 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
USP47-202ENST00000339865 CHTOPQ9Y3Y2 248 aaKnown RBP10.97□□□□□ -0.65
USP47-202ENST00000339865 PLXND1Q9Y4D7 1925 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 PAX4O43316 350 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 H2BFSP57053 126 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 TMEM91Q6ZNR0 172 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 HELZP42694 1942 aaKnown RBP10.97□□□□□ -0.65
USP47-202ENST00000339865 HMGCLL1Q8TB92 370 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 CD7P09564 240 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
USP47-202ENST00000339865 KDM3BQ7LBC6 1761 aa10.96□□□□□ -0.65
USP47-202ENST00000339865 VENTXO95231 258 aa10.96□□□□□ -0.65
USP47-202ENST00000339865 INO80CQ6PI98 192 aaPredicted RBP10.96□□□□□ -0.65
USP47-202ENST00000339865 MAST2Q6P0Q8 1798 aa10.96□□□□□ -0.65
USP47-202ENST00000339865 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
USP47-202ENST00000339865 IGKCP01834 107 aa10.96□□□□□ -0.65
USP47-202ENST00000339865 GAGE2AQ6NT46 116 aa10.96□□□□□ -0.65
USP47-202ENST00000339865 FMC1Q96HJ9 113 aa10.96□□□□□ -0.65
USP47-202ENST00000339865 GTF3AQ92664 365 aaKnown RBP10.96□□□□□ -0.66
USP47-202ENST00000339865 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.66
USP47-202ENST00000339865 FDCSPQ8NFU4 85 aa10.96□□□□□ -0.66
USP47-202ENST00000339865 OR52E5Q8NH55 327 aa10.96□□□□□ -0.66
USP47-202ENST00000339865 HOXB3P14651 431 aaPredicted RBP10.96□□□□□ -0.66
USP47-202ENST00000339865 STPG1Q5TH74 334 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms