RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 RNF126Q9BV68 326 aa11.55□□□□□ -0.56
NIPAL3-202ENST00000339255 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 H0YIZ8 118 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 FCN1O00602 326 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 TSC22D2O75157 780 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 RPL23AP62750 156 aaKnown RBP11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 CX3CL1P78423 397 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 ZNF546Q86UE3 836 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 NOXA1Q86UR1 476 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 INO80EQ8NBZ0 244 aaPredicted RBP11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 ZNF418Q8TF45 676 aaPredicted RBP11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 SRSF12Q8WXF0 261 aaKnown RBP11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 DCUN1D4Q92564 292 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 ARPC1AQ92747 370 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 HINT2Q9BX68 163 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 HEYLQ9NQ87 328 aaPredicted RBP11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
NIPAL3-202ENST00000339255 CYSRT1A8MQ03 144 aa11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 CLDN34H7C241 214 aa11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 SCAF4O95104 1147 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 NUP62P37198 522 aaPredicted RBP11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 P2RY1P47900 373 aa11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 RPP30P78346 268 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 FXYD3Q14802 87 aa11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 C10orf55Q5SWW7 151 aa11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 C11orf1Q9H5F2 150 aa11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 FN1P02751 2386 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-202ENST00000339255 AMY1AP04745 511 aa11.52□□□□□ -0.56
NIPAL3-202ENST00000339255 LYRM2Q9NU23 88 aaPredicted RBP11.52□□□□□ -0.56
NIPAL3-202ENST00000339255 U3KQ87 197 aa11.52□□□□□ -0.56
NIPAL3-202ENST00000339255 IGHV7-81A0A0B4J1V7 117 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 KCNAB3O43448 404 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 OPN1MWP04001 364 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 FAM157CP0CG43 387 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 IAPPP10997 89 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 VDAC2P45880 294 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 CAV2P51636 162 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 ERHP84090 104 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 SPINK9Q5DT21 86 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 OR2C3Q8N628 320 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 OR11H4Q8NGC9 324 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 GRPEL2Q8TAA5 225 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 JMJD8Q96S16 334 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 NPFFR1Q9GZQ6 430 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 SLC25A31Q9H0C2 315 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 TNFSF18Q9UNG2 199 aa11.52□□□□□ -0.57
NIPAL3-202ENST00000339255 IGLC7A0M8Q6 106 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 DNAJC9-AS1A6NH13 148 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 CGB1A6NKQ9 187 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 INAFM1C9JVW0 142 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 BOLA2-SMG1P6H3BVE0 249 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 ARPC5O15511 151 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 TMEM50AO95807 157 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 MYOD1P15172 320 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 HTR2BP41595 481 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 RPL15P61313 204 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 ZNF345Q14585 488 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 AQP10Q96PS8 301 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 PSENENQ9NZ42 101 aa11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 STRAPQ9Y3F4 350 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-202ENST00000339255 A0A1B0GW64 132 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 MSGN1A6NI15 193 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 SNCAP37840 140 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 PAX9P55771 341 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 Q71RC1 249 aaPredicted RBP11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 STX12Q86Y82 276 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 OR10W1Q8NGF6 305 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 SGMS2Q8NHU3 365 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 ABHD5Q8WTS1 349 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 TMEM68Q96MH6 324 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 HSPB9Q9BQS6 159 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 ZNF580Q9UK33 172 aa11.5□□□□□ -0.57
NIPAL3-202ENST00000339255 E7EUB6 86 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 CRLF1O75462 422 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 IFNA10P01566 189 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 IGHG2P01859 326 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 EIF2B2P49770 351 aaKnown RBP11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 SUB1P53999 127 aaKnown RBP eCLIP11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 HILS1P60008 231 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 WT1-ASQ06250 92 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 BAXQ07812 192 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 OR2F1Q13607 317 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 ACOT7LQ6ZUV0 252 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 MFFQ9GZY8 342 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 RNF222A6NCQ9 220 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 H3BP45 60 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 NPY1RP25929 384 aa11.49□□□□□ -0.57
NIPAL3-202ENST00000339255 RPL12P30050 165 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms