RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 UPK2O00526 184 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 RBFOX2O43251 390 aaKnown RBP eCLIP8.44□□□□□ -1.06
CSMD2-202ENST00000338325 GNG2P59768 71 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 ZNF124Q15973 351 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 POU2AF1Q16633 256 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 THOC7Q6I9Y2 204 aaKnown RBP8.44□□□□□ -1.06
CSMD2-202ENST00000338325 GDPD1Q8N9F7 314 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 OR10W1Q8NGF6 305 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 SECTM1Q8WVN6 248 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 ATP6V0BQ99437 205 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 CCL28Q9NRJ3 127 aa8.44□□□□□ -1.06
CSMD2-202ENST00000338325 RYR1P21817 5038 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 IGHV3OR16-8A0A075B7F1 116 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 EBAG9O00559 213 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 ZNF207O43670 478 aaKnown RBP8.43□□□□□ -1.06
CSMD2-202ENST00000338325 SSX5O60225 188 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 HPRT1P00492 218 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 FGF2P09038 288 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 NQO2P16083 231 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 CMC4P56277 68 aaPredicted RBP8.43□□□□□ -1.06
CSMD2-202ENST00000338325 CATR1Q13166 79 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 SLC25A24Q6NUK1 477 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 PRSS48Q7RTY5 328 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 ZBTB34Q8NCN2 500 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 OR13F1Q8NGS4 319 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 OR11H2Q8NH07 326 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 CHRDL1Q9BU40 450 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 TMEM140Q9NV12 185 aa8.43□□□□□ -1.06
CSMD2-202ENST00000338325 C15orf62A8K5M9 175 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 SULT1C2O00338 296 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 SCGNO76038 276 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 SERPINE2P07093 398 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 TRAPPC2P0DI81 140 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 TRAPPC2BP0DI82 140 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 OR13C7P0DN81 318 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 ADMP35318 185 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 ARPC4P59998 168 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 HSD17B13Q7Z5P4 300 aaPredicted RBP8.42□□□□□ -1.06
CSMD2-202ENST00000338325 NR2C2APQ86WQ0 139 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 RNF2Q99496 336 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 ETV7Q9Y603 341 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
CSMD2-202ENST00000338325 PKHD1P08F94 4074 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 DNAH2Q9P225 4427 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 IGHV3-21A0A0B4J1V1 117 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
CSMD2-202ENST00000338325 FCGR2CP31995 323 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 WT1-ASQ06250 92 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 TBCEQ15813 527 aaPredicted RBP8.41□□□□□ -1.06
CSMD2-202ENST00000338325 ZNF367Q7RTV3 350 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 UBAC2Q8NBM4 344 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 PLEKHA2Q9HB19 425 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 NDUFB11Q9NX14 153 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 APLNQ9ULZ1 77 aa8.41□□□□□ -1.06
CSMD2-202ENST00000338325 F11RQ9Y624 299 aaKnown RBP8.41□□□□□ -1.06
CSMD2-202ENST00000338325 IGHV7-4-1A0A0J9YVY3 117 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 TEX50A0A1B0GTY4 177 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 TRDV1A0A1B0GX56 115 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 SMIM30A4D0T7 59 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 IGLL5B9A064 214 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 CHEK1O14757 476 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 DEFB4AO15263 64 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 CA1P00915 261 aaPredicted RBP8.4□□□□□ -1.06
CSMD2-202ENST00000338325 PPYP01298 95 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 TFPI2P48307 235 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 MFAP2P55001 183 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 Q56UQ5 140 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 ZNF773Q6PK81 442 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 LINC00336Q6ZUF6 198 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 GVQW1Q8N7I0 195 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 TMEM116Q8NCL8 245 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 BEST4Q8NFU0 473 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 OR1L8Q8NGR8 309 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 SCARB1Q8WTV0 552 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 SLC5A7Q9GZV3 580 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 COMMD9Q9P000 198 aa8.4□□□□□ -1.06
CSMD2-202ENST00000338325 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.06
CSMD2-202ENST00000338325 IGKV3-7A0A075B6H7 116 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 C11orf94C9JXX5 98 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 K7EIM0 57 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 MRPS14O60783 128 aaKnown RBP8.39□□□□□ -1.07
CSMD2-202ENST00000338325 PTHLHP12272 177 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 ERVK-16P61578 105 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
CSMD2-202ENST00000338325 TMEM187Q14656 261 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 C22orf42Q6IC83 251 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 OR51H1Q8NH63 302 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 LSM10Q969L4 123 aaKnown RBP8.39□□□□□ -1.07
CSMD2-202ENST00000338325 CMTM3Q96MX0 182 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 NDUFA4L2Q9NRX3 87 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 NOTOA8MTQ0 251 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 CTSGP08311 255 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 AQP4P55087 323 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 FXYD4P59646 89 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 AADACL3Q5VUY0 350 aa8.39□□□□□ -1.07
CSMD2-202ENST00000338325 ZNF818PQ6ZRF7 136 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms