RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 GTF3C1Q12789 2109 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 CRISP2P16562 243 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 RPRMLQ8N4K4 120 aa12.54□□□□□ -0.4
C9orf47-201ENST00000334490 C5orf63A6NC05 138 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
C9orf47-201ENST00000334490 CRIM1Q9NZV1 1036 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 IGHV3-11P01762 117 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 GPR183P32249 361 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 FOXA2Q9Y261 457 aaPredicted RBP12.53□□□□□ -0.4
C9orf47-201ENST00000334490 TMEM189A5PLL7 270 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 SAA1P0DJI8 122 aaPredicted RBP12.53□□□□□ -0.4
C9orf47-201ENST00000334490 ZNF250P15622 560 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 FAM74A7A6NL05 159 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 A8MWL6 223 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 TMEM178BH3BS89 294 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 ARL14EPLP0DKL9 152 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 RRN3P1Q2M238 152 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 SLC25A33Q9BSK2 321 aa12.53□□□□□ -0.4
C9orf47-201ENST00000334490 PNRC2Q9NPJ4 139 aaKnown RBP12.53□□□□□ -0.4
C9orf47-201ENST00000334490 PRSS1P07477 247 aa12.52□□□□□ -0.4
C9orf47-201ENST00000334490 EP400Q96L91 3159 aa12.52□□□□□ -0.4
C9orf47-201ENST00000334490 IER3P46695 156 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 MFAP2P55001 183 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 ZP1P60852 638 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 SSC4DQ8WTU2 575 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 C19orf24Q9BVV8 132 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 DLX6P56179 175 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 HIST3H3Q16695 136 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 TMEM116Q8NCL8 245 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 NUP37Q8NFH4 326 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 SH3BGRL3Q9H299 93 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 SMDT1Q9H4I9 107 aa12.52□□□□□ -0.41
C9orf47-201ENST00000334490 SNRPD3P62318 126 aaKnown RBP12.51□□□□□ -0.41
C9orf47-201ENST00000334490 PSG9Q00887 426 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 OR11H4Q8NGC9 324 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 SGMS2Q8NHU3 365 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 NEUROG1Q92886 237 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 SPSB4Q96A44 273 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 A0A1W2PRX2 142 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 PHOX2AO14813 284 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 TIMM23O14925 209 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 LY6HO94772 140 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 HSPB1P04792 205 aaKnown RBP12.51□□□□□ -0.41
C9orf47-201ENST00000334490 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 WDR25Q64LD2 544 aaPredicted RBP12.51□□□□□ -0.41
C9orf47-201ENST00000334490 JMJD8Q96S16 334 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 PRSS22Q9GZN4 317 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 ISLRO14498 428 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 IGKV3-20P01619 116 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 CYP2G1PQ6ZSU1 146 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 CBLN2Q8IUK8 224 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 SGK494Q96LW2 274 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 PSPNO60542 156 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 ADIPOQQ15848 244 aa12.51□□□□□ -0.41
C9orf47-201ENST00000334490 SRSF12Q8WXF0 261 aaKnown RBP12.51□□□□□ -0.41
C9orf47-201ENST00000334490 RRHO14718 337 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 LILRA1O75019 489 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 NMBP08949 121 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 SIGIRRQ6IA17 410 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 RPUSD1Q9UJJ7 312 aaKnown RBP12.5□□□□□ -0.41
C9orf47-201ENST00000334490 A0A0A6YYD4 124 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 IGHV3-66A0A0C4DH42 116 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 M0QZK8 103 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 TOMM20LQ6UXN7 152 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 CLEC19AQ6UXS0 136 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 LINC00305Q7Z4B0 112 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 KLHDC1Q8N7A1 406 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 VOPP1Q96AW1 172 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 TP53BP1Q12888 1972 aaPredicted RBP12.5□□□□□ -0.41
C9orf47-201ENST00000334490 SIAH2O43255 324 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 GFI1Q99684 422 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 PROK2Q9HC23 129 aa12.5□□□□□ -0.41
C9orf47-201ENST00000334490 F8VVB4 439 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 F8VWA3 439 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 CRYBB3P26998 211 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 PTTG1IPP53801 180 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 ELOVL1Q9BW60 279 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 IGKV1D-8A0A087WSZ0 117 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 LINC00862A6NCI5 91 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 B4DSR2 109 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 UPK2O00526 184 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 AMY1AP04745 511 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 GPX1P07203 203 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 SP5Q6BEB4 398 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-201ENST00000334490 MRPL32Q9BYC8 188 aaKnown RBP12.49□□□□□ -0.41
C9orf47-201ENST00000334490 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
C9orf47-201ENST00000334490 OR10D4PQ8NGN7 298 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 ATRXP46100 2492 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 CD8AP01732 235 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 IL6RP08887 468 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-201ENST00000334490 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-201ENST00000334490 PMS2P11Q13670 270 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 RNF212Q495C1 297 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms