RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 LEAP2Q969E1 77 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 IL22RA2Q969J5 263 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 REEP6Q96HR9 211 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 KRTAP3-1Q9BYR8 98 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 SMDT1Q9H4I9 107 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 DUSP21Q9H596 190 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 GNB4Q9HAV0 340 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 MCUBQ9NWR8 336 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 SPANXCQ9NY87 97 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 COMMD9Q9P000 198 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PIPOXQ9P0Z9 390 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PRELID1Q9Y255 219 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 TMED3Q9Y3Q3 217 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 hCG_2014768A0A024R1R8 64 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 IGLV11-55A0A075B6I3 123 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 TRBV6-7A0A0A0MS04 114 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 NCF1BA6NI72 391 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 FFAR3O14843 346 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SLC31A2O15432 143 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 CLPTM1O96005 669 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 DHFRP00374 187 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 CYB5R3P00387 301 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SERPINA1P01009 418 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 OR9G9P0C7N8 305 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 CALCBP10092 127 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 HLA-DRB4P13762 266 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF20P17024 532 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ATF1P18846 271 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 EDNRAP25101 427 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 TGFBR1P36897 503 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 RFC3P40938 356 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 HTR5AP47898 357 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 RHOGP84095 191 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 IFITM3Q01628 133 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SURF2Q15527 256 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 DGUOKQ16854 277 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SPDYE7PQ495Y7 208 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 FFAR4Q5NUL3 377 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM268Q5VZI3 342 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 RAB12Q6IQ22 244 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 PET117Q6UWS5 81 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 FOXI2Q6ZQN5 318 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 AHSA2Q719I0 299 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 CLECL1Q8IZS7 167 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 DYNAPQ8N1N2 210 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 IQCF1Q8N6M8 205 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 OR4D11Q8NGI4 311 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 OR5AK2Q8NH90 309 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 STOML3Q8TAV4 291 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF502Q8TBZ5 544 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 PYDC1Q8WXC3 89 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 STMN2Q93045 179 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM203Q969S6 136 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ISOC2Q96AB3 205 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 NSMCE2Q96MF7 247 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 KCTD14Q9BQ13 255 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SCRT1Q9BWW7 348 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 DCSTAMPQ9H295 470 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ARV1Q9H2C2 271 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 IFI27L2Q9H2X8 130 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SIRT7Q9NRC8 400 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 MRPL22Q9NWU5 206 aaKnown RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 KCNE3Q9Y6H6 103 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 HLA-DRB4X5D2U9 266 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ALPK2Q86TB3 2170 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 NINQ8N4C6 2090 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 A0A087WXM4 84 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 RIIAD1A6NNX1 92 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF670-ZNF695F2Z2N8 137 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 J3KRW8 73 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 CORTO00230 105 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 BMPR1BO00238 502 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 SOCS3O14543 225 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 DEGS1O15121 323 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 OR10H3O60404 316 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 PRAF2O60831 178 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 NAPSAO96009 420 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 IGLV2-23P01705 113 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 HLA-HP01893 362 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 BCHEP06276 602 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 HOXB5P09067 269 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 UCHL1P09936 223 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 OR4E1P0C645 316 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 TLX1NBP0CAT3 122 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 IFI30P13284 250 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF32P17041 273 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 S100PP25815 95 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 GTF2E2P29084 291 aaKnown RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ATP1B3P54709 279 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 LGALS4P56470 323 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 CLDN17P56750 224 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 LINC01547P58512 204 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 MLLT11Q13015 90 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 GK2Q14410 553 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ELOBQ15370 118 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ACTBL2Q562R1 376 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 GPR107Q5VW38 600 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 RSBN1Q5VWQ0 802 aaPredicted RBP0.99□□□□□ -2.25
LINC00643-201ENST00000334389 TBPL2Q6SJ96 375 aa0.99□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF497Q6ZNH5 498 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms