RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 ROS1P08922 2347 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 PROP1O75360 226 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 IGHV3-13P01766 116 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 IGHV3-7P01780 117 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 MT-ND6P03923 174 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 TDGF1P13385 188 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 CRYBB3P26998 211 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 SRIP30626 198 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 TMPRSS3P57727 454 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 ERVK-16P61578 105 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 CX3CL1P78423 397 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 EDDM3AQ14507 147 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 OR10J3Q5JRS4 329 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
SNX20-202ENST00000330943 WDR73Q6P4I2 378 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 TMEM136Q6ZRR5 245 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 FAM19A2Q8N3H0 131 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 TMEM251Q8N6I4 163 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 LSM4Q9Y4Z0 139 aaKnown RBP11.94□□□□□ -0.5
SNX20-202ENST00000330943 PTPRBP23467 1997 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 NBASA2RRP1 2371 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 AKAP13Q12802 2813 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 HELTA6NFD8 242 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 M0R1X1 148 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 C3orf79P0CE67 100 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 RPL19P84098 196 aaKnown RBP11.94□□□□□ -0.5
SNX20-202ENST00000330943 MRPL49Q13405 166 aaKnown RBP11.94□□□□□ -0.5
SNX20-202ENST00000330943 TEPPQ6URK8 271 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 ATOH7Q8N100 152 aa11.94□□□□□ -0.5
SNX20-202ENST00000330943 C20orf202A1L168 122 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 SPINT2O43291 252 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 ZNF324O75467 553 aaPredicted RBP11.93□□□□□ -0.5
SNX20-202ENST00000330943 GABRA6Q16445 453 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 AARDQ4LEZ3 155 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 ABHD17BQ5VST6 288 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 ASCL3Q9NQ33 180 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 NTF3P20783 257 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 MPV17P39210 176 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 SSPNQ14714 243 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 PSG5Q15238 335 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 ACP7Q6ZNF0 438 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 MIR17HGQ75NE6 70 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 TIPARPQ7Z3E1 657 aaKnown RBP11.93□□□□□ -0.5
SNX20-202ENST00000330943 GCNT2Q8N0V5 402 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 GNG12Q9UBI6 72 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 TCF19Q9Y242 345 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 DPRXA6NFQ7 191 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 IQCF6A8MYZ5 107 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 RELBQ01201 579 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 RPL39P5Q59GN2 51 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 ARRDC1-AS1Q9H2J1 176 aa11.93□□□□□ -0.5
SNX20-202ENST00000330943 SAA2-SAA4A0A096LPE2 208 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 LINC00696Q6ZRV3 163 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 C11orf53Q8IXP5 236 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 TMEM140Q9NV12 185 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 OTOGLQ3ZCN5 2332 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 BMPR1BO00238 502 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 IGFBP2P18065 325 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 Q6ZVH6 145 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 NIT1Q86X76 327 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 SERTAD4Q9NUC0 356 aa11.92□□□□□ -0.5
SNX20-202ENST00000330943 FAM90A9PA6NNJ1 464 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 SP1P08047 785 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 GNG10P50151 68 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 RAB31Q13636 194 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 TIGITQ495A1 244 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 C1orf210Q8IVY1 113 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 CCL25O15444 150 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 MGST1P10620 155 aaKnown RBP11.91□□□□□ -0.5
SNX20-202ENST00000330943 NPY1RP25929 384 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 HINT1P49773 126 aaPredicted RBP11.91□□□□□ -0.5
SNX20-202ENST00000330943 PRRX1P54821 245 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 C6orf15Q6UXA7 325 aaPredicted RBP11.91□□□□□ -0.5
SNX20-202ENST00000330943 KLF14Q8TD94 323 aaPredicted RBP11.91□□□□□ -0.5
SNX20-202ENST00000330943 FAM216AQ8WUB2 273 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 GCM1Q9NP62 436 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 CDC42EP3Q9UKI2 254 aa11.91□□□□□ -0.5
SNX20-202ENST00000330943 AHRRA9YTQ3 701 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 C15orf65H3BRN8 121 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 J3QW42 95 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 MMP23AO75900 390 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 AMY1AP04745 511 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 ADH4P08319 380 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 OR10J4P0C629 311 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 AREGP15514 252 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 TSKUQ8WUA8 353 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 BORCS7Q96B45 105 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 IL19Q9UHD0 177 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.9□□□□□ -0.5
SNX20-202ENST00000330943 CA2P00918 260 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 LCN12Q6JVE5 192 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 WDR82Q6UXN9 313 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 KLHDC1Q8N7A1 406 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 SLC24A4Q8NFF2 622 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 S1PR3Q99500 378 aa11.9□□□□□ -0.5
SNX20-202ENST00000330943 HINT2Q9BX68 163 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms