RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 TMEM170AQ8WVE7 144 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 C14orf144Q96I85 54 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 SIRT7Q9NRC8 400 aa12.98□□□□□ -0.33
SHISA2-201ENST00000319420 LRRK2Q5S007 2527 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 HRASP01112 189 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 HSPB1P04792 205 aaKnown RBP12.97□□□□□ -0.33
SHISA2-201ENST00000319420 MEF2CQ06413 473 aaPredicted RBP12.97□□□□□ -0.33
SHISA2-201ENST00000319420 HABP2Q14520 560 aaPredicted RBP12.97□□□□□ -0.33
SHISA2-201ENST00000319420 EFNB3Q15768 340 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 SSX8Q7RTT4 187 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 OR10G4Q8NGN3 311 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 OR10G9Q8NGN4 311 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 OR10G7Q8NGN6 311 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 SMDT1Q9H4I9 107 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 ZNF462Q96JM2 2506 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 POLQO75417 2590 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHISA2-201ENST00000319420 UBTD1Q9HAC8 227 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 ZFHX3Q15911 3703 aa12.97□□□□□ -0.33
SHISA2-201ENST00000319420 APOA2P02652 100 aa12.96□□□□□ -0.33
SHISA2-201ENST00000319420 IGHV1-8P0DP01 117 aa12.96□□□□□ -0.33
SHISA2-201ENST00000319420 TAS2R60P59551 318 aa12.96□□□□□ -0.33
SHISA2-201ENST00000319420 KHDC3LQ587J8 217 aa12.96□□□□□ -0.33
SHISA2-201ENST00000319420 E7EUB6 86 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 CA2P00918 260 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 BCL2P10415 239 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 KIR2DS2P43631 304 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 ARF6P62330 175 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 DLK1P80370 383 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 FBXL19-AS1Q494R0 122 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.34
SHISA2-201ENST00000319420 PRORYQ9H606 182 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 TPSG1Q9NRR2 321 aa12.96□□□□□ -0.34
SHISA2-201ENST00000319420 REG1AP05451 166 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 VDAC2P45880 294 aaPredicted RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 HSPE1P61604 102 aaKnown RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 KIAA0141Q14154 515 aaPredicted RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 FAM90A2PQ658T7 463 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 FLYWCH2Q96CP2 140 aaKnown RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 USP24Q9UPU5 2620 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 H0YJW9 148 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 TNFRSF13BO14836 293 aaPredicted RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 SLC25A17O43808 307 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 CD24P25063 80 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 NPY1RP25929 384 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 TAGLN2P37802 199 aaKnown RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 RHEBQ15382 184 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 ZNF674Q2M3X9 581 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 MIC13Q5XKP0 118 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 ZNF343Q6P1L6 599 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 SLC24A4Q8NFF2 622 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 NCOR1P1Q9H4R4 102 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 PLEKHA3Q9HB20 300 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 DMRT1Q9Y5R6 373 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 PPIAL4CA0A0B4J2A2 164 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 C5orf52A6NGY3 159 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 PPIAL4GP0DN37 164 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 CENPVQ7Z7K6 275 aaPredicted RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 Q8N7P7 452 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.95□□□□□ -0.34
SHISA2-201ENST00000319420 ADTRPQ96IZ2 230 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 SSX3Q99909 188 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 TMEM204Q9BSN7 226 aa12.95□□□□□ -0.34
SHISA2-201ENST00000319420 C19orf84I3L1E1 186 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 OR2C1O95371 312 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 UBE2G2P60604 165 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 GNB2P62879 340 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 PDLIM3Q53GG5 364 aaPredicted RBP12.94□□□□□ -0.34
SHISA2-201ENST00000319420 NEU1Q99519 415 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 RAB1BQ9H0U4 201 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 URGCP-MRPS24S4R325 110 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 CELSR2Q9HCU4 2923 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 UBE2CO00762 179 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 GATA2P23769 480 aaPredicted RBP12.94□□□□□ -0.34
SHISA2-201ENST00000319420 CNTFRP26992 372 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 ATP6V1FQ16864 119 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 RAB24Q969Q5 203 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 COMMD5Q9GZQ3 224 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 LINC00574Q9H8X3 128 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 TMEM14BQ9NUH8 114 aa12.94□□□□□ -0.34
SHISA2-201ENST00000319420 MT-ND4LP03901 98 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
SHISA2-201ENST00000319420 G0S2P27469 103 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 TREML4Q6UXN2 200 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 C11orf42Q8N5U0 333 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 TUBA4BQ9H853 241 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 TIMM9Q9Y5J7 89 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 TEX50A0A1B0GTY4 177 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 ITGB1BP1O14713 200 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 RAB5AP20339 215 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 GNB1P62873 340 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 RPP30P78346 268 aaKnown RBP12.93□□□□□ -0.34
SHISA2-201ENST00000319420 VWC2Q2TAL6 325 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 AARDQ4LEZ3 155 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 CDPF1Q6NVV7 123 aa12.93□□□□□ -0.34
SHISA2-201ENST00000319420 CBY1Q9Y3M2 126 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms