RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 CRYGCP07315 174 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 OR13C7P0DN81 318 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 UCP3P55916 312 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 TAS2R19P59542 299 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 STEAP1BQ6NZ63 245 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 H2BFWTQ7Z2G1 175 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 OR1L8Q8NGR8 309 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 MRGPRFQ96AM1 343 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 ISOC1Q96CN7 298 aa12.27□□□□□ -0.45
HDDC2-201ENST00000318787 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 GGCTO75223 188 aaKnown RBP12.26□□□□□ -0.45
HDDC2-201ENST00000318787 OR2C1O95371 312 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 IGLV1-51P01701 117 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 PIGPP57054 158 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 SLC25A24Q6NUK1 477 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 ARRDC1Q8N5I2 433 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 TMEM229BQ8NBD8 167 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 DYNLRB2Q8TF09 96 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 CCDC140Q96MF4 163 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 BCL7BQ9BQE9 202 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 SELENOKQ9Y6D0 94 aa12.26□□□□□ -0.45
HDDC2-201ENST00000318787 IGLV11-55A0A075B6I3 123 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 IGHV3-21A0A0B4J1V1 117 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 ZNF320A2RRD8 509 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 CYB5BO43169 146 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 CSN3P07498 182 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 TBPP20226 339 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 OR4A16Q8NH70 328 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 MARCH1Q8TCQ1 289 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 LSM10Q969L4 123 aaKnown RBP12.25□□□□□ -0.45
HDDC2-201ENST00000318787 THYN1Q9P016 225 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 COPZ2Q9P299 210 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 PRNDQ9UKY0 176 aa12.25□□□□□ -0.45
HDDC2-201ENST00000318787 GPR183P32249 361 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 AKR1C2P52895 323 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
HDDC2-201ENST00000318787 WT1-ASQ06250 92 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 TRIM16LQ309B1 348 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 FAM209BQ5JX69 171 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 THOC7Q6I9Y2 204 aaKnown RBP12.24□□□□□ -0.45
HDDC2-201ENST00000318787 GDPD1Q8N9F7 314 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 OR13C8Q8NGS7 320 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 MCFD2Q8NI22 146 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 RNASE11Q8TAA1 199 aaKnown RBP12.24□□□□□ -0.45
HDDC2-201ENST00000318787 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 TSC22D3Q99576 134 aa12.24□□□□□ -0.45
HDDC2-201ENST00000318787 IGHV3-35A0A0C4DH35 117 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 DBX1A6NMT0 343 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 C15orf61A6NNL5 157 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 H0Y980 276 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 TPPPO94811 219 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 IGKV1-39P01597 117 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 IGKV1D-39P04432 117 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 EDN2P20800 178 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 LCN12Q6JVE5 192 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 IL34Q6ZMJ4 242 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 LHFPL1Q86WI0 220 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 CCDC71LQ8N9Z2 235 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 UBAC2Q8NBM4 344 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 TERB2Q8NHR7 220 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 ZFAND1Q8TCF1 268 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 SMIM4Q8WVI0 70 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 ZNF486Q96H40 463 aaPredicted RBP12.23□□□□□ -0.45
HDDC2-201ENST00000318787 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 TP53RKQ96S44 253 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 SRSF8Q9BRL6 282 aaKnown RBP12.23□□□□□ -0.45
HDDC2-201ENST00000318787 FKBP11Q9NYL4 201 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 COL7A1Q02388 2944 aa12.23□□□□□ -0.45
HDDC2-201ENST00000318787 TRBV7-1A0A0A6YYK4 115 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 C3orf85A0A1B0GTC6 90 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 IZUMO1RA6ND01 250 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 DISC1C4P0D8 188 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 CD74P04233 296 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 CLEC3BP05452 202 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 MEF2DQ14814 521 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 SP6Q3SY56 376 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 SPINK9Q5DT21 86 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 HSD17B13Q7Z5P4 300 aaPredicted RBP12.22□□□□□ -0.45
HDDC2-201ENST00000318787 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 SEC22AQ96IW7 307 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 SLIRPQ9GZT3 109 aaKnown RBP12.22□□□□□ -0.45
HDDC2-201ENST00000318787 NDUFA4L2Q9NRX3 87 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 C14orf166Q9Y224 244 aaKnown RBP12.22□□□□□ -0.45
HDDC2-201ENST00000318787 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
HDDC2-201ENST00000318787 FGF2P09038 288 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 FRMD6-AS1P0C7T7 363 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 AKAIN1P0CW23 69 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 RND3P61587 244 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 SSBP1Q04837 148 aaKnown RBP12.21□□□□□ -0.45
HDDC2-201ENST00000318787 FAM106AQ4KMX7 169 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 PLET1Q6UQ28 207 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 SGPP2Q8IWX5 399 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 OR4C16Q8NGL9 310 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 OR5B3Q8NH48 314 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 CACNG8Q8WXS5 425 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.45
HDDC2-201ENST00000318787 TMEM14BQ9NUH8 114 aa12.21□□□□□ -0.45
HDDC2-201ENST00000318787 F11RQ9Y624 299 aaKnown RBP12.21□□□□□ -0.45
HDDC2-201ENST00000318787 CEPT1Q9Y6K0 416 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms